RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 TNFRSF13CQ96RJ3 184 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 NDEL1Q9GZM8 345 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 C1orf198Q9H425 327 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 YAE1D1Q9NRH1 226 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 MAN2C1Q9NTJ4 1040 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 EGFL7Q9UHF1 273 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 SLC7A8Q9UHI5 535 aa15.19■□□□□ 0.02
NUP50-208ENST00000430547 FAM32AQ9Y421 112 aaKnown RBP15.19■□□□□ 0.02
NUP50-208ENST00000430547 EFCAB9A8MZ26 197 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 MGRN1O60291 552 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 GLRXP35754 106 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 SLC9A3P48764 834 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 CTXN1P60606 82 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 RPL27P61353 136 aaKnown RBP15.18■□□□□ 0.02
NUP50-208ENST00000430547 GNGT1P63211 74 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 PRKCDQ05655 676 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 TMEM249Q2WGJ8 235 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 ANKDD1AQ495B1 522 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 C10orf128Q5T292 105 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 LRRC18Q8N456 261 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 RBM15BQ8NDT2 890 aaKnown RBP15.18■□□□□ 0.02
NUP50-208ENST00000430547 SLC30A7Q8NEW0 376 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 OR51A7Q8NH64 312 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 FGFBP3Q8TAT2 258 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 FNDC8Q8TC99 324 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 NEU4Q8WWR8 484 aaPredicted RBP15.18■□□□□ 0.02
NUP50-208ENST00000430547 MRPL24Q96A35 216 aaKnown RBP15.18■□□□□ 0.02
NUP50-208ENST00000430547 SEPHS2Q99611 448 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 DOK1Q99704 481 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 SMURF2Q9HAU4 748 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 CDH20Q9HBT6 801 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 CCNB1IP1Q9NPC3 277 aa15.18■□□□□ 0.02
NUP50-208ENST00000430547 SAMD4AQ9UPU9 718 aaKnown RBP15.18■□□□□ 0.02
NUP50-208ENST00000430547 TRAV27A0A087WT01 109 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 IQCMA0A1B0GVH7 501 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 LOC390937A0A1W2PQ73 354 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 SLC22A23A1A5C7 686 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 FFAR1O14842 300 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 GPRIN2O60269 458 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 SLC2A10O95528 541 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 MAKP20794 623 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 USF1P22415 310 aaPredicted RBP15.17■□□□□ 0.02
NUP50-208ENST00000430547 GUCA1AP43080 201 aaPredicted RBP15.17■□□□□ 0.02
NUP50-208ENST00000430547 LSM11P83369 360 aaKnown RBP eCLIP15.17■□□□□ 0.02
NUP50-208ENST00000430547 HSF2Q03933 536 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 GGTLC2Q14390 218 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 TBC1D28Q2M2D7 210 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 FAM205BPQ63HN1 556 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 GLYATQ6IB77 296 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 MBOAT2Q6ZWT7 520 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 IGFN1Q86VF2 1251 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 MEX3DQ86XN8 651 aaKnown RBP15.17■□□□□ 0.02
NUP50-208ENST00000430547 ZNF584Q8IVC4 421 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 RNF148Q8N7C7 305 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 OR1J2Q8NGS2 313 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 NSMAFQ92636 917 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 HDAC2Q92769 488 aaKnown RBP15.17■□□□□ 0.02
NUP50-208ENST00000430547 RBP7Q96R05 134 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 ALG12Q9BV10 488 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 LRMDAQ9H2I8 198 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 ANKRD19PQ9H560 264 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 ENPP4Q9Y6X5 453 aa15.17■□□□□ 0.02
NUP50-208ENST00000430547 SONP18583 2426 aaKnown RBP15.17■□□□□ 0.02
NUP50-208ENST00000430547 A0A087WUU8 490 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 A0A096LNT2 108 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 A6NIZ1 184 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 M0R233 179 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 SYNGR3O43761 229 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 IGHMP01871 453 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 ADRA2AP08913 450 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 RPL4P36578 427 aaKnown RBP15.16■□□□□ 0.02
NUP50-208ENST00000430547 GPR4P46093 362 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 EVX1P49640 407 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 RAP1BP61224 184 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 RAP1AP62834 184 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 MRPS34P82930 218 aaKnown RBP15.16■□□□□ 0.02
NUP50-208ENST00000430547 FMODQ06828 376 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 IQCCQ4KMZ1 466 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 FGD3Q5JSP0 725 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 ZNF540Q8NDQ6 660 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 OR13C2Q8NGS9 318 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 KCNK17Q96T54 332 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 SYT3Q9BQG1 590 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 MRPL37Q9BZE1 423 aaKnown RBP15.16■□□□□ 0.02
NUP50-208ENST00000430547 NMNAT1Q9HAN9 279 aaPredicted RBP15.16■□□□□ 0.02
NUP50-208ENST00000430547 SIAEQ9HAT2 523 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 ZNF346Q9UL40 294 aaKnown RBP15.16■□□□□ 0.02
NUP50-208ENST00000430547 TMEM5Q9Y2B1 443 aa15.16■□□□□ 0.02
NUP50-208ENST00000430547 TMEM129A0AVI4 362 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 A8MV72 311 aaPredicted RBP15.15■□□□□ 0.02
NUP50-208ENST00000430547 CRLF1O75462 422 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 DCTN3O75935 186 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 H1F0P07305 194 aaKnown RBP15.15■□□□□ 0.02
NUP50-208ENST00000430547 DAOP14920 347 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 TCN1P20061 433 aaPredicted RBP15.15■□□□□ 0.02
NUP50-208ENST00000430547 FUT4P22083 530 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 CDAP32320 146 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 APLNRP35414 380 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 NR4A2P43354 598 aa15.15■□□□□ 0.02
NUP50-208ENST00000430547 ZNF133P52736 654 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms