RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ADAM8P78325 824 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 MEP1BQ16820 701 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 DEFB133Q30KQ1 61 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 CD276Q5ZPR3 534 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 ELP2Q6IA86 826 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 IGF2-ASQ6U949 168 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 CARFQ8N187 725 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 TOE1Q96GM8 510 aaKnown RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 SHDQ96IW2 340 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 TMEM185BQ9H7F4 350 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 WDR76Q9H967 626 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 SEC61A2Q9H9S3 476 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 ELOVL3Q9HB03 270 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 C2orf42Q9NWW7 574 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 CGGBP1Q9UFW8 167 aaPredicted RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 SCP2D1Q9UJQ7 156 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 BAIAP2Q9UQB8 552 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 MRPS17Q9Y2R5 130 aaKnown RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 ZNF337Q9Y3M9 751 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 HEATR5AQ86XA9 2040 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 C13orf42A0A1B0GVH6 325 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 A0A1W2PPL8 197 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 CFDP00746 253 aaPredicted RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 PLATP00750 562 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 IGKV1D-16P01601 117 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 CDKN2AP42771 156 aaKnown RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 RABIFP47224 123 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 ARRB1P49407 418 aaPredicted RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 EFNB1P98172 346 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 SORDQ00796 357 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 SIGLEC14Q08ET2 396 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 GSG1Q2KHT4 349 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 DMKNQ6E0U4 476 aaPredicted RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 TMEM184AQ6ZMB5 413 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 C3P1Q6ZMU1 363 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 FOXRED2Q8IWF2 684 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 ZNF248Q8NDW4 579 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 OR51A4Q8NGJ6 313 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 OR5M1Q8NGP8 315 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 BAHD1Q8TBE0 780 aaPredicted RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 KISS1RQ969F8 398 aaPredicted RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 DPYSL5Q9BPU6 564 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 ACTR6Q9GZN1 396 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 PPP1R14DQ9NXH3 145 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 DNAJB12Q9NXW2 375 aaKnown RBP7.34□□□□□ -1.23
HPS4-205ENST00000429411 APC2O95996 2303 aa7.34□□□□□ -1.23
HPS4-205ENST00000429411 LTBP2Q14767 1821 aa7.34□□□□□ -1.24
HPS4-205ENST00000429411 LEUTXA8MZ59 168 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 K7EQS6 105 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 CTNSO60931 367 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 AMY2AP04746 511 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 CD2P06729 351 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SLC35E2P0CK97 266 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 RAB38P57729 211 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SLC26A5P58743 744 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 NANOS3P60323 173 aaKnown RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 CBFBQ13951 182 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 LGALSLQ3ZCW2 172 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 KLHL26Q53HC5 615 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 C1QL3Q5VWW1 255 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 GLB1L2Q8IW92 636 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 OR51S1Q8NGJ8 323 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 EDAQ92838 391 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 PGLYRP3Q96LB9 341 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 EMC7Q9NPA0 242 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZNF223Q9UK11 482 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 VDAC3Q9Y277 283 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 FITM1A5D6W6 292 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 H3BML4 177 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 RP2O75695 350 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ECDO95905 644 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 MYF5P13349 255 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 HOXB1P14653 301 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZNF823P16415 610 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 NSDHLQ15738 373 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SLC36A2Q495M3 483 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 FAM209BQ5JX69 171 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 FAM198BQ6UWH4 519 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SLC35F3Q8IY50 421 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 BCORP1Q8N888 145 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZNF485Q8NCK3 441 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 OR56B2PQ8NGI1 322 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 OR51Q1Q8NH59 317 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SMIM4Q8WVI0 70 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZNF700Q9H0M5 742 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 NCOR1P1Q9H4R4 102 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 DLL4Q9NR61 685 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 MED11Q9P086 117 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 KCNG2Q9UJ96 466 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 LRRK1Q38SD2 2015 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 FREM2Q5SZK8 3169 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 RHPN2P1A8MT19 583 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ACOT7O00154 380 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 DCTN6O00399 190 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 CCSO14618 274 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SIGLEC5O15389 551 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms