RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DNAL1Q4LDG9 190 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 LDLRAP1Q5SW96 308 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 GARNL3Q5VVW2 1013 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR52E8Q6IFG1 317 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PYHIN1Q6K0P9 492 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 TMEM220Q6QAJ8 160 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 UTS2BQ765I0 119 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 FCRLAQ7L513 359 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 NDUFAF7Q7L592 441 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 HDDC2Q7Z4H3 204 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PAQR7Q86WK9 346 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PHF13Q86YI8 300 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZBED8Q8IZ13 594 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 NPWQ8N729 165 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 GPR26Q8NDV2 337 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR11G2Q8NGC1 345 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 RNASE11Q8TAA1 199 aaKnown RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 GRPEL2Q8TAA5 225 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 LHFPL5Q8TAF8 219 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 LCN9Q8WX39 176 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 METTL21AQ8WXB1 218 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 DNAJC9Q8WXX5 260 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 EXT2Q93063 718 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 VPS33AQ96AX1 596 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 DNAJC1Q96KC8 554 aaKnown RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 CYTH2Q99418 400 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PINK1Q9BXM7 581 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC26A1Q9H2B4 701 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 CAB39LQ9H9S4 337 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 TREM1Q9NP99 234 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 RBM22Q9NW64 420 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 DHCR7Q9UBM7 475 aaKnown RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PSMD13Q9UNM6 376 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PLCL2Q9UPR0 1127 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 AURKCQ9UQB9 309 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 TDRKHQ9Y2W6 561 aaKnown RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 MPDZO75970 2070 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PHF3Q92576 2039 aaKnown RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 HIVEP2P31629 2446 aa3.78□□□□□ -1.81
HMGB3P5-201ENST00000428894 ATRQ13535 2644 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CPAMD8Q8IZJ3 1885 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 STAB1Q9NY15 2570 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A1B0GX78 115 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A1W2PPM1 405 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR5H15A6NDH6 313 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 EFCAB10A6NFE3 127 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 VSTM2BA6NLU5 285 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 USP27XA6NNY8 438 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 EVPLLA8MZ36 301 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 SHISA9B4DS77 424 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 H3BMH7 237 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRIM77I1YAP6 450 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCRL2O00421 344 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 PHOX2AO14813 284 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 AIM2O14862 343 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 MTX2O75431 263 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CTAG2O75638 210 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCNKO75909 580 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 MYO1DO94832 1006 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 RAB3DO95716 219 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 FAM107AO95990 144 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 DHFRP00374 187 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 SERPINA7P05543 415 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 GP9P14770 177 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 SPAM1P38567 509 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CAPZA2P47755 286 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ERFP50548 548 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ARHGDIAP52565 204 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 NKX2-5P52952 324 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 AP2S1P53680 142 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 EIF3EP60228 445 aaKnown RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ATP6V0D1P61421 351 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 NAA20P61599 178 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 HTD2P86397 168 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRADDQ15628 312 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 SSX2Q16385 188 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 MS4A18Q3C1V0 323 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 LIN52Q52LA3 116 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TFDP3Q5H9I0 405 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TXNRD3NBQ6F5E7 133 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 Q71RC1 249 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 AMIGO1Q86WK6 493 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 DOLPP1Q86YN1 238 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 LRRC8AQ8IWT6 810 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 LIX1Q8N485 282 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 RAB3IL1Q8TBN0 382 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 MCOLN3Q8TDD5 553 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 GIPC3Q8TF64 312 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 PIK3R3Q92569 461 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 PPP1R36Q96LQ0 422 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF285Q96NJ3 590 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 MCEEQ96PE7 176 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CSPG4P5Q96PW8 444 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 SMIM14Q96QK8 99 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 PANX2Q96RD6 677 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ABHD1Q96SE0 405 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 SNRNP25Q9BV90 132 aaKnown RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF717Q9BY31 904 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 WWP1Q9H0M0 922 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms