RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SLC1A3P43003 542 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 UBE2IP63279 158 aaKnown RBP9.7□□□□□ -0.86
TCOF1-204ENST00000427724 GPR50Q13585 617 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 KANSL1Q7Z3B3 1105 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 TMED4Q7Z7H5 227 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 TRAPPC6BQ86SZ2 158 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 OR10G3Q8NGC4 313 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 NPRL2Q8WTW4 380 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 SPTSSAQ969W0 71 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 BPIFA2Q96DR5 249 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 OR52D1Q9H346 318 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 C19orf53Q9UNZ5 99 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-204ENST00000427724 RASD1Q9Y272 281 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 SLCO1B1Q9Y6L6 691 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 CSF3P09919 207 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 PTPN6P29350 595 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 RAE1P78406 368 aaKnown RBP9.7□□□□□ -0.86
TCOF1-204ENST00000427724 PDE7AQ13946 482 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 SEC23BQ15437 767 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 SLC25A24Q6NUK1 477 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 NANOGP1Q8N7R0 232 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 SDR9C7Q8NEX9 313 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 FAM71F1Q96KD3 344 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-204ENST00000427724 DIMT1Q9UNQ2 313 aaKnown RBP9.7□□□□□ -0.86
TCOF1-204ENST00000427724 LCTP09848 1927 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 RLFQ13129 1914 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 PMS2P1A4D2B8 440 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 ICOSLGO75144 302 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 ABHD16AO95870 558 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF35P13682 527 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 TAS2R43P59537 309 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 PRPS1P60891 318 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 ASAH1Q13510 395 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 TP53I3Q53FA7 332 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 C17orf107Q6ZR85 190 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 ANKRD37Q7Z713 158 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 ROBO4Q8WZ75 1007 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 RND1Q92730 232 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 EMC6Q9BV81 110 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 WWTR1Q9GZV5 400 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 IFT46Q9NQC8 304 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM14AQ9Y6G1 99 aa9.7□□□□□ -0.86
TCOF1-204ENST00000427724 TIMM8AO60220 97 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 WNT11O96014 354 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF883P0CG24 379 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF250P15622 560 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 CRABP1P29762 137 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 HTR5AP47898 357 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 BIDP55957 195 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 GLO1Q04760 184 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 LY6DQ14210 128 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM211Q6ICI0 200 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 CCDC71Q8IV32 467 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM41AQ96HV5 264 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 OR11A1Q9GZK7 315 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ACTR6Q9GZN1 396 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ZFP64Q9NPA5 681 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 MYOTQ9UBF9 498 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 COPS3Q9UNS2 423 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 IGHV3-15A0A0B4J1V0 119 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 A6NIZ1 184 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ERVH48-1M5A8F1 160 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 HMGN4O00479 90 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 TOR1AO14656 332 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 PIP5K1CO60331 668 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ADH7P40394 386 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 RAP1BP61224 184 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 SNRPGP62308 76 aaKnown RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 RAP1AP62834 184 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 FXNQ16595 210 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 PGGHGQ32M88 737 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 FCRL6Q6DN72 434 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 JMJD6Q6NYC1 403 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 C3orf33Q6P1S2 294 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 PRSS42Q7Z5A4 293 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 LAS2Q8IYD9 372 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF436Q9C0F3 470 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 CCDC88CQ9P219 2028 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 HTTP42858 3142 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 LOC100509620A0A075B734 347 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 SOCS6O14544 535 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 LIFP15018 202 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 PNLIPP16233 465 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 GABRA5P31644 462 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 RIDAP52758 137 aaKnown RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 TSPAN31Q12999 210 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 SQSTM1Q13501 440 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 RPL13AP3Q6NVV1 102 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 CLDN22Q8N7P3 220 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 OR52N5Q8NH56 324 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 OR5W2Q8NH69 310 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 ACOT12Q8WYK0 555 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 GSX2Q9BZM3 304 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 A4GALTQ9NPC4 353 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 LANCL2Q9NS86 450 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 DECR2Q9NUI1 292 aa9.69□□□□□ -0.86
TCOF1-204ENST00000427724 AK6Q9Y3D8 172 aaKnown RBP9.69□□□□□ -0.86
TCOF1-204ENST00000427724 GMDSO60547 372 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms