RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 VANGL1Q8TAA9 524 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 NEIL3Q8TAT5 605 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 ZFAND1Q8TCF1 268 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 SLC38A5Q8WUX1 472 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 CORO2AQ92828 525 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 OSTF1Q92882 214 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 RAB7BQ96AH8 199 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 LRR1Q96L50 414 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 IL4I1Q96RQ9 567 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 SLC22A12Q96S37 553 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 SDHCQ99643 169 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 SLX1AQ9BQ83 275 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 C7orf50Q9BRJ6 194 aaKnown RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 GTPBP2Q9BX10 602 aaKnown RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 ZBP1Q9H171 429 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 OR51B5Q9H339 312 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 PIGUQ9H490 435 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 FOLH1BQ9HBA9 442 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 BCL2L10Q9HD36 194 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 SPHK2Q9NRA0 654 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 ZCCHC3Q9NUD5 404 aaKnown RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 C14orf105Q9NVL8 296 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 LYARQ9NX58 379 aaKnown RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 HAO2Q9NYQ3 351 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 TAS2R16Q9NYV7 291 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 EMC3Q9P0I2 261 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 COPZ2Q9P299 210 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 TEKT2Q9UIF3 430 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 ABT1Q9ULW3 272 aaKnown RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 LIPT1Q9Y234 373 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 ASF1AQ9Y294 204 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 RBMX2Q9Y388 322 aaKnown RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 MMP24Q9Y5R2 645 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 SPIN1Q9Y657 262 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 TMEM131Q92545 1883 aa4.49□□□□□ -1.69
LINC00458-202ENST00000427299 COL5A1P20908 1838 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-202ENST00000427299 LRP4O75096 1905 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 FANCMQ8IYD8 2048 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 SCN3AQ9NY46 2000 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 FAM240BA0A1B0GVZ2 78 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 A0A1W2PQL4 384 aaPredicted RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ANKRD61A6NGH8 418 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 DUXAA6NLW8 204 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 M0R129 80 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 HMGN4O00479 90 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 KPNA3O00505 521 aaPredicted RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 TFECO14948 347 aaPredicted RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 SMAD9O15198 467 aaKnown RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 TEX28O15482 410 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 LYRM1O43325 122 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 STX11O75558 287 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 OR5F1O95221 314 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 HMGN1P05114 100 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 HBQ1P09105 142 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 CSF3P09919 207 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 PSKH1P11801 424 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 SPNP16150 400 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ZNF10P21506 573 aaPredicted RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 F8A1P23610 371 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 TEAD1P28347 426 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 PKLRP30613 574 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 SLC1A3P43003 542 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 CCT3P49368 545 aaKnown RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 GPR143P51810 404 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 NKX2-5P52952 324 aaPredicted RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 LIM2P55344 173 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 CLDN20P56880 219 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 BTG1P62324 171 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 CDK5Q00535 292 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 SLAMF1Q13291 335 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 IL18Q14116 193 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ELAVL3Q14576 367 aaKnown RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 DECR1Q16698 335 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 TATDN3Q17R31 274 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 PNLIPRP3Q17RR3 467 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 PGGHGQ32M88 737 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 C2orf76Q3KRA6 126 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 KLHL12Q53G59 568 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 LRRC73Q5JTD7 316 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 NXNL2Q5VZ03 156 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 HBMQ6B0K9 141 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 C22orf42Q6IC83 251 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ADNP2Q6IQ32 1131 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 PAMR1Q6UXH9 720 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ZNF852Q6ZMS4 543 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 PLEKHM3Q6ZWE6 761 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 NUP54Q7Z3B4 507 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 C6orf120Q7Z4R8 191 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 RANBP3LQ86VV4 465 aaPredicted RBP4.48□□□□□ -1.69
LINC00458-202ENST00000427299 TUSC5Q8IXB3 177 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 Q8N402 240 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 LMNTD1Q8N9Z9 388 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 POC1AQ8NBT0 407 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ATP6V1C2Q8NEY4 427 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 OR2T33Q8NG76 320 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 GPR32P1Q8NGA4 272 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 OR8K5Q8NH50 307 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 SLC7A13Q8TCU3 470 aa4.48□□□□□ -1.69
LINC00458-202ENST00000427299 ARSGQ96EG1 525 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms