RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GPR4P46093 362 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 PPOXP50336 477 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 MYBPC1Q00872 1141 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 ZP4Q12836 540 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 NPRL3Q12980 569 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 LAPTM4AQ15012 233 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 FAM120AOSQ5T036 256 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 TBPL2Q6SJ96 375 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 CYP2R1Q6VVX0 501 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 ZNF813Q6ZN06 617 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 RINLQ6ZS11 566 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 IGFN1Q86VF2 1251 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 CDK20Q8IZL9 346 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 OR52J3Q8NH60 311 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 OR51A7Q8NH64 312 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 MCUR1Q96AQ8 359 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 PYURFQ96I23 114 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 BPESC1Q9GZL8 116 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 ZNF442Q9H7R0 627 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 NOX3Q9HBY0 568 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 INIPQ9NRY2 104 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 FAM53CQ9NYF3 392 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 LPAR3Q9UBY5 353 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 TRAV27A0A087WT01 109 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 A0A087WUU8 490 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 LOC100289279A0A1B0GTE1 492 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 ZNF99A8MXY4 864 aaPredicted RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 EFCAB9A8MZ26 197 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 LILRA1O75019 489 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 CRYAAP02489 173 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 H1F0P07305 194 aaKnown RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 TACSTD2P09758 323 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 CD79AP11912 226 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 B4GALT1P15291 398 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 MAKP20794 623 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 CALB2P22676 271 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 IDH3GP51553 393 aaPredicted RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 SNRPD2P62316 118 aaKnown RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 SPIBQ01892 262 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 PIGFQ07326 219 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 ALG10Q5BKT4 473 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 SYT14Q8NB59 555 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 OR4F15Q8NGB8 312 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 OR13C2Q8NGS9 318 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 OR6X1Q8NH79 312 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 ACOT11Q8WXI4 607 aaPredicted RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 C1orf159Q96HA4 380 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 FAM46AQ96IP4 442 aaKnown RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 SEPHS2Q99611 448 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 PIMREGQ9BSJ6 248 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 SHARPINQ9H0F6 387 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 GORASP2Q9H8Y8 452 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 NMNAT1Q9HAN9 279 aaPredicted RBP11.19□□□□□ -0.62
VRK3-203ENST00000424804 MAN2C1Q9NTJ4 1040 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 ZNF224Q9NZL3 707 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 CD300AQ9UGN4 299 aa11.19□□□□□ -0.62
VRK3-203ENST00000424804 LRP5LA4QPB2 252 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 IGHG1P01857 330 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 APEHP13798 732 aaKnown RBP11.18□□□□□ -0.62
VRK3-203ENST00000424804 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
VRK3-203ENST00000424804 PRKCDQ05655 676 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 RIN1Q13671 783 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 FAM166AQ6J272 317 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 VHLLQ6RSH7 139 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 MBOAT2Q6ZWT7 520 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 ZNF627Q7L945 461 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 OAFQ86UD1 273 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 MDP1Q86V88 176 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 SLC25A44Q96H78 314 aaPredicted RBP11.18□□□□□ -0.62
VRK3-203ENST00000424804 LRR1Q96L50 414 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 ZNF347Q96SE7 839 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 FOXB1Q99853 325 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 MYOZ1Q9NP98 299 aaPredicted RBP11.18□□□□□ -0.62
VRK3-203ENST00000424804 GLTPQ9NZD2 209 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 NDUFAF4Q9P032 175 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 FKBP7Q9Y680 259 aa11.18□□□□□ -0.62
VRK3-203ENST00000424804 PRSS23O95084 383 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 HLA-HP01893 362 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 FABP3P05413 133 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 QDPRP09417 244 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 PGA4P0DJD7 388 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 PGA3P0DJD8 388 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 ZNF35P13682 527 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 ITGA2P17301 1181 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 RHCEP18577 417 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 RPL4P36578 427 aaKnown RBP11.17□□□□□ -0.62
VRK3-203ENST00000424804 CTXN1P60606 82 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 RUNX1T1Q06455 604 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 CD47Q08722 323 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 TSEN54Q7Z6J9 526 aaKnown RBP11.17□□□□□ -0.62
VRK3-203ENST00000424804 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
VRK3-203ENST00000424804 ZNF786Q8N393 782 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 SVOPLQ8N434 492 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 ASB10Q8WXI3 467 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 TMEM54Q969K7 222 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 CCDC124Q96CT7 223 aaKnown RBP11.17□□□□□ -0.62
VRK3-203ENST00000424804 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms