RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 LRRN1Q6UXK5 716 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 NDUFAF7Q7L592 441 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 GATSQ8NAP1 163 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 BPIFCQ8NFQ6 507 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 RPS4Y2Q8TD47 263 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 TMEM106AQ96A25 262 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 ADAT1Q9BUB4 502 aaKnown RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 NMNAT2Q9BZQ4 307 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 POFUT1Q9H488 388 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 MYEF2Q9P2K5 600 aaKnown RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 IKZF2Q9UKS7 526 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 SPTY2D1-AS1A0A0U1RR47 76 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 PRR19A6NJB7 356 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 M0R296 226 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 XRCC3O43542 346 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 F13BP05160 661 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 CTSBP07858 339 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 CTSEP14091 401 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 CD38P28907 300 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 MAP3K8P41279 467 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 ALKBH1Q13686 389 aaKnown RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 LY6G6FQ5SQ64 297 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 LINC00114Q6XXX2 140 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 LRRC69Q6ZNQ3 347 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 RNF44Q7L0R7 432 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 TAF8Q7Z7C8 310 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 ATOH1Q92858 354 aaPredicted RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 RELTQ969Z4 430 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 PPP1R14AQ96A00 147 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 PTDSS2Q9BVG9 487 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 SRMSQ9H3Y6 488 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 ZMAT3Q9HA38 289 aaKnown RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 C14orf105Q9NVL8 296 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 GLS2Q9UI32 602 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 PILRAQ9UKJ1 303 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 LHX6Q9UPM6 363 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 THADAQ6YHU6 1953 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 GGT3PA6NGU5 568 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 M0QYG6 137 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CCSO14618 274 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CTAG2O75638 210 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CD1AP06126 327 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CSRP1P21291 193 aaKnown RBP12.98□□□□□ -0.33
MSH5-206ENST00000423982 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
MSH5-206ENST00000423982 FCRL6Q6DN72 434 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 TMEM88Q6PEY1 159 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 FLVCR1-AS1Q8TAF5 88 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CCDC74AQ96AQ1 378 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 STACQ99469 402 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 SLITRK2Q9H156 845 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 TMEM185BQ9H7F4 350 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 APMAPQ9HDC9 416 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 MKKSQ9NPJ1 570 aaPredicted RBP12.98□□□□□ -0.33
MSH5-206ENST00000423982 TAS2R3Q9NYW6 316 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CPNE7Q9UBL6 633 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CACNA1HO95180 2353 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 GPR89AB7ZAQ6 455 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 HCRTR1O43613 425 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 GLCEO94923 617 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 ITGA5P08648 1049 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 GPR89BP0CG08 455 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 MC2RQ01718 297 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 TMEM205Q6UW68 189 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 ZNF546Q86UE3 836 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 CLRN3Q8NCR9 226 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 OR6K3Q8NGY3 331 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 OR6N1Q8NGY5 312 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 NT5CQ8TCD5 201 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 NSMAFQ92636 917 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 TM4SF19Q96DZ7 209 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 SEC22AQ96IW7 307 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 AMELYQ99218 206 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 TRIM2Q9C040 744 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 WDR76Q9H967 626 aa12.98□□□□□ -0.33
MSH5-206ENST00000423982 B4DGG1 531 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 CYR61O00622 381 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 PRAMEF2O60811 474 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 GPR75O95800 540 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 POU3F4P49335 361 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 LUMP51884 338 aaPredicted RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 YPEL5P62699 121 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 ULK3Q6PHR2 472 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 DPY19L2P2Q6ZN68 376 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 DNM1P46Q6ZS02 220 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 C1orf210Q8IVY1 113 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 SAMD14Q8IZD0 417 aaPredicted RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 C10orf53Q8N6V4 93 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 PHYHIPQ92561 330 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 MOGAT1Q96PD6 335 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 LMF1Q96S06 567 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 HPF1Q9NWY4 346 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 LRIT1Q9P2V4 623 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 STEAP1Q9UHE8 339 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 FANCMQ8IYD8 2048 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 H0YGG7 62 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 ZNF254O75437 659 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 TNFP01375 233 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms