RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF544Q6NX49 715 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 B3GLCTQ6Y288 498 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 C3orf62Q6ZUJ4 267 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 RAPH1Q70E73 1250 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 BHLHA15Q7RTS1 189 aaPredicted RBP4□□□□□ -1.77
CDC42EP3-202ENST00000422687 LRRC8AQ8IWT6 810 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 TUSC5Q8IXB3 177 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAM9CQ8IZT9 166 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF619Q8N2I2 560 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 SLC35F6Q8N357 371 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 SLC43A2Q8N370 569 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 C1orf52Q8N6N3 182 aaKnown RBP4□□□□□ -1.77
CDC42EP3-202ENST00000422687 BANPQ8N9N5 519 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR4F6Q8NGB9 312 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR4C3Q8NH37 302 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 PRSS3P2Q8NHM4 247 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAM110BQ8TC76 370 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 ABHD3Q8WU67 409 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZFAND2BQ8WV99 257 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 DDB2Q92466 427 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF75CPQ92670 426 aaPredicted RBP4□□□□□ -1.77
CDC42EP3-202ENST00000422687 CPNE4Q96A23 557 aaPredicted RBP4□□□□□ -1.77
CDC42EP3-202ENST00000422687 RNF145Q96MT1 663 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 SRXN1Q9BYN0 137 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 ELOVL6Q9H5J4 265 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 COQ10BQ9H8M1 238 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 CHMP1AQ9HD42 196 aaPredicted RBP4□□□□□ -1.77
CDC42EP3-202ENST00000422687 NMRK1Q9NWW6 199 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 VPS29Q9UBQ0 182 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 GAGE2DQ9UEU5 116 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 KCNS2Q9ULS6 477 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 TMCO1Q9UM00 188 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 SNX6Q9UNH7 406 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 MGAT4BQ9UQ53 548 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 POMT1Q9Y6A1 747 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 PCNX3Q9H6A9 2034 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 NBEAL2Q6ZNJ1 2754 aa4□□□□□ -1.77
CDC42EP3-202ENST00000422687 IGHV4-61A0A0C4DH41 118 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 A0A1W2PQD3 144 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR5H1A6NKK0 313 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ANXA2P2A6NMY6 339 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF724A8MTY0 619 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 SLCO1B7G3V0H7 640 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ABCD4O14678 606 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ANKRD28O15084 1053 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 TCF21O43680 179 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PCDH7O60245 1069 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 OXSR1O95747 527 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 OTCP00480 354 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 TCP1P17987 556 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 HNF1AP20823 631 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PTNP21246 168 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 IGHV1-2P23083 117 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 EDNRAP25101 427 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 STX2P32856 288 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PCGF2P35227 344 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 EIF1P41567 113 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 NR4A2P43354 598 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 MAGEA12P43365 314 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PSMD4P55036 377 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PTGR1Q14914 329 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 HEPACAMQ14CZ8 416 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 RAB35Q15286 201 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 RBMS2Q15434 407 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 TRADDQ15628 312 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZSWIM7Q19AV6 140 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAM174BQ3ZCQ3 159 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 SLC25A53Q5H9E4 307 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PDSS1Q5T2R2 415 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 MORN5Q5VZ52 161 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 TTC19Q6DKK2 380 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 IL17RELQ6ZVW7 336 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 FCRLAQ7L513 359 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PIWIL3Q7Z3Z3 882 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 MISPQ8IVT2 679 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 CTAGE3PQ8IX95 158 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 KLHL7Q8IXQ5 586 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 MUC15Q8N387 334 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF433Q8N7K0 673 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PAPD5Q8NDF8 572 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 C16orf78Q8WTQ4 265 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 SELENOMQ8WWX9 145 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 CORO2AQ92828 525 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 EXOSC8Q96B26 276 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZMYND19Q96E35 227 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PHF21BQ96EK2 531 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 AMDHD1Q96NU7 426 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PSD2Q9BQI7 771 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 ACPTQ9BZG2 426 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 TBL1XR1Q9BZK7 514 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 GLIPR2Q9H4G4 154 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 EML4Q9HC35 981 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 TIGARQ9NQ88 270 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 RCC2Q9P258 522 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 MRTO4Q9UKD2 239 aaKnown RBP3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 GRID1Q9ULK0 1009 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 VDAC3Q9Y277 283 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 SNX24Q9Y343 169 aa3.99□□□□□ -1.77
CDC42EP3-202ENST00000422687 PAM16Q9Y3D7 125 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms