RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PDCD1LG2Q9BQ51 273 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 LOXL2Q9Y4K0 774 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 A0A1B0GWA3 101 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 APOBEC1P41238 236 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 MAML2Q8IZL2 1156 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 CHTF18Q8WVB6 975 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ELAVL4P26378 380 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 CSNK1G2P78368 415 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ARHGAP11BQ3KRB8 267 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 C1orf140Q5VVS0 124 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 OR1S2Q8NGQ3 325 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SLC39A13Q96H72 371 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 EMC6Q9BV81 110 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SLAMF8Q9P0V8 285 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 RCE1Q9Y256 329 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 NPFFR2Q9Y5X5 522 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 IGFBP1P08833 259 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 COX20Q5RI15 118 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 TBPL2Q6SJ96 375 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SLCO4C1Q6ZQN7 724 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 CPPED1Q9BRF8 314 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 CRLF2Q9HC73 371 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 MBNL1Q9NR56 388 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ALKBH6Q3KRA9 238 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF718Q3SXZ3 478 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM52BQ4KMG9 183 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 OR8G2PQ6IF36 304 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 GRINAQ7Z429 371 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SUMF1Q8NBK3 374 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 PFN4Q8NHR9 129 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 FAM213BQ8TBF2 198 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ARRDC2Q8TBH0 407 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 LYRM4Q9HD34 91 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 NRIP3Q9NQ35 241 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 LRIT2A6NDA9 550 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ARNTLO00327 626 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 FABP1P07148 127 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SRPXP78539 464 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 RTL8BQ17RB0 113 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SEMA6DQ8NFY4 1073 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ZDHHC5Q9C0B5 715 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 CHRNA9Q9UGM1 479 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 OR52A1Q9UKL2 312 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 SLCO2B1O94956 709 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ADH4P08319 380 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 GLYATL3Q5SZD4 288 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 SLC48A1Q6P1K1 146 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 DPPA2Q7Z7J5 298 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 PGBD5Q8N414 524 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 OR1E3Q8WZA6 343 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 C8orf44Q96CB5 159 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 KIRREL1Q96J84 757 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 MMP17Q9ULZ9 603 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ZNFX1Q9P2E3 1918 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ESPL1Q14674 2120 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 AIPO00170 330 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ABCD4O14678 606 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 NUDT7P0C024 238 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TBPP20226 339 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TESK1Q15569 626 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 MEP1BQ16820 701 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 LYPD4Q6UWN0 246 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 NAXDQ8IW45 347 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM104Q8NE00 496 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 FBXO27Q8NI29 283 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 GHSRQ92847 366 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ZMAT3Q9HA38 289 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ISYNA1Q9NPH2 558 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 MED17Q9NVC6 651 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 CLEC1BQ9P126 229 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 A0A096LPE4 126 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 A0A1W2PPZ6 126 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 B3GALT4O96024 378 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ALDOCP09972 364 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ARR3P36575 388 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 DLX5P56178 289 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 FLI1Q01543 452 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 EBPQ15125 230 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM207Q6UWW9 146 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ABHD11Q8NFV4 315 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 LKAAEAR1Q8TD35 194 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 NEURL3Q96EH8 262 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ZIC5Q96T25 663 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TINAGL1Q9GZM7 467 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 DOCK1Q14185 1865 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 SH2D1BO14796 132 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 MT-ATP6P00846 226 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 KIAA1024LP59773 190 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 HSF1Q00613 529 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 SELPLGQ14242 412 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 PLPP7Q8NBV4 271 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 CXorf36Q9H7Y0 433 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 FAM212BQ9NTI7 297 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 HRH3Q9Y5N1 445 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms