RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 LIPHQ8WWY8 451 aa13.09□□□□□ -0.31
HDAC9-208ENST00000417496 KLHDC7BQ96G42 594 aa13.09□□□□□ -0.31
HDAC9-208ENST00000417496 SLC38A3Q99624 504 aa13.09□□□□□ -0.31
HDAC9-208ENST00000417496 ZMAT3Q9HA38 289 aaKnown RBP13.09□□□□□ -0.31
HDAC9-208ENST00000417496 EMC3Q9P0I2 261 aa13.09□□□□□ -0.31
HDAC9-208ENST00000417496 TRBV5-7A0A0A0MS05 114 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 GGT3PA6NGU5 568 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 RENP00797 406 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 CD3DP04234 171 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 CPN1P15169 458 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 CAPZBP47756 277 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 GABRA4P48169 554 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 SKP1P63208 163 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 C2orf76Q3KRA6 126 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 DCAF12L2Q5VW00 463 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 ALKAL2Q6UX46 152 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 SDR16C5Q8N3Y7 309 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 RADILQ96JH8 1075 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 LCORQ96JN0 433 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-208ENST00000417496 TPSD1Q9BZJ3 242 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 LANCL2Q9NS86 450 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 FBXL3Q9UKT7 428 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 MMP17Q9ULZ9 603 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 ETV7Q9Y603 341 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 LOC105371267A0A1B0GV96 52 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 H7C417 338 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 SLC16A7O60669 478 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 MPZL1O95297 269 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 TXNDC12O95881 172 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 CXCR1P25024 350 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 PPICP45877 212 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 OR7E24Q6IFN5 339 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 MUC20Q8N307 709 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-208ENST00000417496 SPICQ8N5J4 248 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 OTOSQ8NHW6 89 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF417Q8TAU3 575 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 C4orf45Q96LM5 186 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 MTFP1Q9UDX5 166 aa13.08□□□□□ -0.32
HDAC9-208ENST00000417496 OR2M5A3KFT3 312 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 SHISA7A6NL88 538 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 MCRIP1C9JLW8 97 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 SMAD9O15198 467 aaKnown RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 SPARCP09486 303 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 GTF2F2P13984 249 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 MFGE8Q08431 387 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 MELKQ14680 651 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 ACKR1Q16570 336 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 VWA2Q5GFL6 755 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 ANKRD16Q6P6B7 361 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 C3P1Q6ZMU1 363 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 OR11A1Q9GZK7 315 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 ADAM19Q9H013 955 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 KCNN3Q9UGI6 736 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 XKRYO14609 159 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 SDC3O75056 442 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 OR2A4O95047 310 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 GIPP09681 153 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 LBX1P52954 281 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 IKZF1Q13422 519 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 MFSD13AQ14CX5 517 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 NHLRC3Q5JS37 347 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 IDO2Q6ZQW0 420 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 SLC36A1Q7Z2H8 476 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 METTL21AQ8WXB1 218 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 FAM3DQ96BQ1 224 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 CXorf58Q96LI9 332 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF578Q96N58 590 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-208ENST00000417496 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 B9D1Q9UPM9 204 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 PLCL2Q9UPR0 1127 aa13.07□□□□□ -0.32
HDAC9-208ENST00000417496 FXYD6-FXYD2A0A087WZ82 144 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 GOSR2O14653 212 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 SUSD5O60279 629 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF35P13682 527 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 CTLA4P16410 223 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 EGR3Q06889 387 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 CCINQ13939 588 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 RBMS2Q15434 407 aaKnown RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 ARHGAP40Q5TG30 622 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 COQ8AQ8NI60 647 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 ADIPOR1Q96A54 375 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 MRI1Q9BV20 369 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 NUDT9Q9BW91 350 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 ATG5Q9H1Y0 275 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM138Q9NPI0 162 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 MRPL22Q9NWU5 206 aaKnown RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 RABL2AQ9UBK7 228 aaPredicted RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 CDV3Q9UKY7 258 aaKnown RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 RABL2BQ9UNT1 228 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 LDOC1O95751 146 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms