RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CD79BP40259 229 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 OR1E2P47887 323 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 GSK3BP49841 420 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 CDH12P55289 794 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 FOXG1P55316 489 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 PSME3P61289 254 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 CSNK2A1P68400 391 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 IL1RL1Q01638 556 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 EGR4Q05215 589 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 LIPEQ05469 1076 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 RBBP4Q09028 425 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 OR1Q1Q15612 314 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 FBXL19-AS1Q494R0 122 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 CYBRD1Q53TN4 286 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 COQ5Q5HYK3 327 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ENTPD8Q5MY95 495 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 C9orf135Q5VTT2 229 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 C1orf140Q5VVS0 124 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 TMEM88Q6PEY1 159 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 DHRS4L2Q6PKH6 230 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 KLHL24Q6TFL4 600 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 DEF8Q6ZN54 512 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 PIGWQ7Z7B1 504 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 PATL1Q86TB9 770 aaKnown RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 GPAT4Q86UL3 456 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 MICU2Q8IYU8 434 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 KDM8Q8N371 416 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 TMEM99Q8N816 258 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ACBD4Q8NC06 268 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 RBM15BQ8NDT2 890 aaKnown RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 BEND2Q8NDZ0 799 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 OR2T12Q8NG77 320 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 OR8J3Q8NGG0 315 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 OR6T1Q8NGN1 323 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 OR6K3Q8NGY3 331 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 SLC25A43Q8WUT9 341 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 TPD52L3Q96J77 140 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 LURAP1Q96LR2 239 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 WFIKKN1Q96NZ8 548 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 SNX18Q96RF0 628 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 CCT8L2Q96SF2 557 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 MCHR1Q99705 422 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ARHGDIGQ99819 225 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 GPATCH1Q9BRR8 931 aaKnown RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 PIGMQ9H3S5 423 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ARMC7Q9H6L4 198 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ARL8BQ9NVJ2 186 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 PARPBPQ9NWS1 579 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 PAQR5Q9NXK6 330 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 ADA2Q9NZK5 511 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 C6orf203Q9P0P8 240 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 TMEM181Q9P2C4 612 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ING1Q9UK53 422 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 ARL2BPQ9Y2Y0 163 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 GMEB1Q9Y692 573 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 V9GYQ6 96 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 IGKV1D-42A0A075B6H8 117 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 A0A0B4J2E0 115 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 A0A1B0GX12 115 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 A0A1W2PR80 420 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ELOVL7A1L3X0 281 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 PRORSD1PA6NEY8 169 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NPIPB13A6NJU9 1138 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 LIPT2A6NK58 231 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NPIPB5A8MRT5 1133 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 A8MVM7 634 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NPIPB4C9JG80 1138 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 CXCR6O00574 342 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ZNF208O43345 1280 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 SERPINI2O75830 405 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 LYZL6O75951 148 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 AHSA1O95433 338 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ZNF682O95780 498 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 LGI1O95970 557 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ADAP00813 363 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NPPAP01160 153 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 THY1P04216 161 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 GPIP06744 558 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 CRHP06850 196 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 YES1P07947 543 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 TCN1P20061 433 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 GTF2E2P29084 291 aaKnown RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 GRPRP30550 384 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 UGT2B10P36537 528 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 YAP1P46937 504 aaKnown RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 RPS6KA3P51812 740 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 SLC35A1P78382 337 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 LTBQ06643 244 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 LGALS3BPQ08380 585 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 RNPS1Q15287 305 aaKnown RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 STK11Q15831 433 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NRF1Q16656 503 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ZSWIM7Q19AV6 140 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 PLAC9Q5JTB6 97 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 OTUD3Q5T2D3 398 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 CASP12Q6UXS9 341 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 TFAP2EQ6VUC0 442 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 WDR88Q6ZMY6 472 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms