RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PAQR4Q8N4S7 273 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 KRTCAP2Q8N6L1 136 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF283Q8N7M2 679 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ANKFN1Q8N957 763 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCDC63Q8NA47 563 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SPERTQ8NA61 448 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 FNDC5Q8NAU1 212 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RBM15BQ8NDT2 890 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ADPRHL1Q8NDY3 354 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 HIPK4Q8NE63 616 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 BHLHE22Q8NFJ8 381 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR4S1Q8NGB4 309 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR8B3Q8NGG8 313 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR4A15Q8NGL6 344 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR1J1Q8NGS3 322 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR52P1PQ8NH57 321 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 VANGL1Q8TAA9 524 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF417Q8TAU3 575 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 KLF14Q8TD94 323 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TWIST2Q8WVJ9 160 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 GEMIN6Q8WXD5 167 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 GATAD2BQ8WXI9 593 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 LRTOMTQ8WZ04 291 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC38A4Q969I6 547 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TUBGCP3Q96CW5 907 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 NEIL1Q96FI4 390 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MARS2Q96GW9 593 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TXNDC15Q96J42 360 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SAMD8Q96LT4 415 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MAGEB18Q96M61 343 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR8B2Q96RD0 313 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF587Q96SQ5 575 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 EPYCQ99645 322 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ARHGDIGQ99819 225 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OCSTAMPQ9BR26 566 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PCGF1Q9BSM1 259 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 EMC6Q9BV81 110 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PTDSS2Q9BVG9 487 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIM15Q9C019 465 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC38A1Q9H2H9 487 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 DPAGT1Q9H3H5 408 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TUBB1Q9H4B7 451 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CACYBPQ9HB71 228 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM165Q9HC07 324 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TCF7L2Q9NQB0 619 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZDHHC18Q9NUE0 388 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ACOXLQ9NUZ1 547 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM38BQ9NVV0 291 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RLIMQ9NVW2 624 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 AURKAIP1Q9NWT8 199 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 GLTPQ9NZD2 209 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF224Q9NZL3 707 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 EIF3KQ9UBQ5 218 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RPS6KB2Q9UBS0 482 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLN8Q9UBY8 286 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MARCOQ9UEW3 520 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MIOXQ9UGB7 285 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TBK1Q9UHD2 729 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF232Q9UNY5 417 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIM33Q9UPN9 1127 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PPP1R3CQ9UQK1 317 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PLXNB1O43157 2135 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRAV36DV7A0A075B6V5 113 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV1-69DA0A0B4J2H0 117 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CENPVL3A0A0U1RRI6 287 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C5orf49A4QMS7 147 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ANKRD61A6NGH8 418 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF879B4DU55 563 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 MS4A18H0YCH9 400 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 RNASEK-C17orf49H0YIS7 233 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C3orf84H3BNL1 204 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM178BH3BS89 294 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 H3BSA7 217 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 K7EIL1 84 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 P2RY10O00398 339 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PHYHO14832 338 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SURF4O15260 269 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ENSAO43768 121 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TIMM8AO60220 97 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PLIN3O60664 434 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIM13O60858 407 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 GLRA3O75311 464 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SERPINI2O75830 405 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TOX4O94842 621 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR6A2O95222 327 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PPP1R3DO95685 299 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 MPIG6BO95866 241 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 HPRP00739 348 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV1-69P01742 117 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV4-59P01825 116 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PROCP04070 461 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 THRBP10828 461 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRG2P13727 222 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 GSTM3P21266 225 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CBLP22681 906 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 STOMP27105 288 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 EPHA3P29320 983 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 GRPRP30550 384 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 GABRA5P31644 462 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CFHR2P36980 270 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms