RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GLO1Q04760 184 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 MLLT11Q13015 90 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 IGFL3Q6UXB1 125 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 FCRLAQ7L513 359 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 SLC16A9Q7RTY1 509 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 OR52N1Q8NH53 320 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 SNX33Q8WV41 574 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 HTRA1Q92743 480 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 TMEM203Q969S6 136 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ADAD1Q96M93 576 aaKnown RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 RBP7Q96R05 134 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 DCUN1D5Q9BTE7 237 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 MRPL13Q9BYD1 178 aaKnown RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 OR51E2Q9H255 320 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 INPP5EQ9NRR6 644 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 KLHDC2Q9Y2U9 406 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 CAB39Q9Y376 341 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 KIAA1549Q9HCM3 1950 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF407Q9C0G0 2248 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 A0A1W2PPL8 197 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF593O00488 134 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-204ENST00000409727 ACTL6AO96019 429 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 SPARCP09486 303 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 PCSK6P29122 969 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 SELENOPP49908 381 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 CTF1Q16619 201 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 SOWAHCQ53LP3 525 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-204ENST00000409727 PLEKHG7Q6ZR37 379 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 CHMP1BQ7LBR1 199 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.07□□□□□ -0.64
CHMP3-204ENST00000409727 HDDC2Q7Z4H3 204 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 ZIC4Q8N9L1 334 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF485Q8NCK3 441 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 OR6N1Q8NGY5 312 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 CHCHD6Q9BRQ6 235 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 PRRG4Q9BZD6 226 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 MRPL22Q9NWU5 206 aaKnown RBP11.07□□□□□ -0.64
CHMP3-204ENST00000409727 DKK4Q9UBT3 224 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 LAMP5Q9UJQ1 280 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 GNG8Q9UK08 70 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 CAMK2AQ9UQM7 478 aa11.07□□□□□ -0.64
CHMP3-204ENST00000409727 A0A1W2PPW3 197 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 E9PI62 339 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF670-ZNF695F2Z2N8 137 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 AIREO43918 545 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 KHDRBS3O75525 346 aaKnown RBP11.06□□□□□ -0.64
CHMP3-204ENST00000409727 GABARAPO95166 117 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 SYNGR4O95473 234 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 QDPRP09417 244 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 NCS1P62166 190 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CXADRP78310 365 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 RASGEF1BQ0VAM2 473 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 AQP6Q13520 282 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 POU4F3Q15319 338 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 TBR1Q16650 682 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 THEM4Q5T1C6 240 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 RPTNQ6XPR3 784 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ASB18Q6ZVZ8 466 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 PHC2Q8IXK0 858 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 FNDC9Q8TBE3 224 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 UFD1Q92890 307 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 MCHR2Q969V1 340 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 FAM122AQ96E09 287 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 OR2M2Q96R28 347 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 TAAR6Q96RI8 345 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 RNF167Q9H6Y7 350 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 SEC61A2Q9H9S3 476 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 KCNG2Q9UJ96 466 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ZMIZ1Q9ULJ6 1067 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 GRIP1Q9Y3R0 1128 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 FLVCR1Q9Y5Y0 555 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF716A6NP11 495 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 PRR32B1ATL7 298 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 C1QTNF9BB2RNN3 333 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 AKAP8O43823 692 aaKnown RBP11.06□□□□□ -0.64
CHMP3-204ENST00000409727 AQP8O94778 261 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 MT-ND5P03915 603 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 C1QTNF9P0C862 333 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CPEP16870 476 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CELP19835 753 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CDAP32320 146 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 NTF4P34130 210 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CSNK1A1P48729 337 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 TMPRSS3P57727 454 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 SPCS2Q15005 226 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ABLIM2Q6H8Q1 611 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 SPATC1Q76KD6 591 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ATCAYQ86WG3 371 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CDC20BQ86Y33 519 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 RBMXL3Q8N7X1 1067 aaKnown RBP11.06□□□□□ -0.64
CHMP3-204ENST00000409727 DOK1Q99704 481 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 SF3B5Q9BWJ5 86 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms