RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ACAA2P42765 397 aaKnown RBP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 GMFBP60983 142 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 FHL5Q5TD97 284 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 NHLRC1Q6VVB1 395 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF782Q6ZMW2 699 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 PXKQ7Z7A4 578 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 OR5AK2Q8NH90 309 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 MRPL48Q96GC5 212 aaKnown RBP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 STACQ99469 402 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 NPAS1Q99742 590 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 WDR77Q9BQA1 342 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 KLHL13Q9P2N7 655 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 SERTAD3Q9UJW9 196 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 DMDP11532 3685 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 IFITM5A6NNB3 132 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 KDM4BO94953 1096 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 AKR7A3O95154 331 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF823P16415 610 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 GALP22466 123 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 SLC2A5P22732 501 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 EID2Q8N6I1 236 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 SMIM4Q8WVI0 70 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 MNTQ99583 582 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 TRPV4Q9HBA0 871 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ALKBH4Q9NXW9 302 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 COPZ2Q9P299 210 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 PLCL2Q9UPR0 1127 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 BAIAP2Q9UQB8 552 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF281Q9Y2X9 895 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 DOCK10Q96BY6 2186 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 PDCD5O14737 125 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 PIN1P1O15428 100 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 IGHV3-9P01782 118 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 TPOP07202 933 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 PCGF3Q3KNV8 242 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 LINC00303Q3SY05 128 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ALKAL2Q6UX46 152 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 SLC2A12Q8TD20 617 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 GABRG3Q99928 467 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 G6PC3Q9BUM1 346 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-204ENST00000409416 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 M0QYG6 137 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 MPC2O95563 127 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CT45A8P0DMV1 189 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CT45A9P0DMV2 189 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 GLI4P10075 376 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CTRB1P17538 263 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 RORAP35398 523 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 GPR143P51810 404 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 ARHGDIBP52566 201 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 MRPS21P82921 87 aaKnown RBP12.13□□□□□ -0.47
COL6A2-204ENST00000409416 DMWDQ09019 674 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 PLA2G7Q13093 441 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CT45A2Q5DJT8 189 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CTRB2Q6GPI1 263 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 LIX1LQ8IVB5 337 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 FAM71F1Q96KD3 344 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-204ENST00000409416 AMELYQ99218 206 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 LYRM4Q9HD34 91 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 SCP2D1Q9UJQ7 156 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 MAB21L2Q9Y586 359 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 C2orf16Q68DN1 1984 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 IGHV3-64DA0A0J9YX35 117 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 A0A1B0GVI7 797 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 PATE3B3GLJ2 98 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-204ENST00000409416 AHSA1O95433 338 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 AK1P00568 194 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 GTF2F2P13984 249 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CCNOP22674 350 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 VAMP1P23763 118 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 DIO1P49895 249 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 ART1P52961 327 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 AP3S2P59780 193 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 GPR85P60893 370 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
COL6A2-204ENST00000409416 STPG1Q5TH74 334 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 C17orf107Q6ZR85 190 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF417Q8TAU3 575 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 PMM1Q92871 262 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 ZDHHC12Q96GR4 267 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 ZNF587Q96SQ5 575 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-204ENST00000409416 LPAR4Q99677 370 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 SARGQ9BW04 601 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 FANCFQ9NPI8 374 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 CA10Q9NS85 328 aa12.13□□□□□ -0.47
COL6A2-204ENST00000409416 AKAP7Q9P0M2 348 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms