RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 C4orf36Q96KX1 117 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SYT4Q9H2B2 425 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SLCO5A1Q9H2Y9 848 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 CMC2Q9NRP2 79 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SIRT3Q9NTG7 399 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 OR5V1Q9UGF6 321 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC35A3Q9Y2D2 325 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 KCNIP3Q9Y2W7 256 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 PCDHGA1Q9Y5H4 931 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 PLXNB3Q9ULL4 1909 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 PI4KAP42356 2102 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 A0A1W2PQF6 199 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 FAM221BA6H8Z2 402 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 UNC119BA6NIH7 251 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 BHLHE40O14503 412 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CD160O95971 181 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 RLN1P04808 185 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 COX5BP10606 129 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 LYL1P12980 280 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 BCKDHBP21953 392 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CDK2P24941 298 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TNFRSF4P43489 277 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 F2RL1P55085 397 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 UCP2P55851 309 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TAS2R41P59536 307 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SIRPAP78324 504 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 MRPS21P82921 87 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SRSF3P84103 164 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 MC1RQ01726 317 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 OC90Q02509 493 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 ZNF234Q14588 700 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TMEM215Q68D42 235 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TNFAIP8L2Q6P589 184 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TMEM64Q6YI46 380 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 IZUMO1Q8IYV9 350 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 GALNT16Q8N428 558 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TMEM229BQ8NBD8 167 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 OR10H4Q8NGA5 316 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 OR5R1Q8NH85 324 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 WFDC5Q8TCV5 224 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 HMGB4Q8WW32 186 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 RLN3Q8WXF3 142 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 C3orf49Q96BT1 292 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 HS6ST2Q96MM7 605 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 GFI1Q99684 422 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SPON2Q9BUD6 331 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC17A9Q9BYT1 436 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 POTEKPQ9BYX7 375 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 MRPL37Q9BZE1 423 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SMOC1Q9H4F8 434 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 ADGRL4Q9HBW9 690 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 KCNE5Q9UJ90 142 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CLEC4AQ9UMR7 237 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 MOKQ9UQ07 419 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 AK6Q9Y3D8 172 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 FLVCR1Q9Y5Y0 555 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 NUMA1Q14980 2115 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CCDC163A0A0D9SF12 145 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TCRBV21S2A2A0A5A6 115 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 PRAMEF27A3QJZ7 478 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 BTBD17A6NE02 478 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 OR2W5A6NFC9 320 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 EIF1AYO14602 144 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 P2RX6O15547 441 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 AK1P00568 194 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 IL2RAP01589 272 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CTSLP07711 333 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 RHOCP08134 193 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SFTA3P0C7M3 94 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 OR2T7P0C7T2 308 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CPT2P23786 658 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 TSPAN7P41732 249 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 EIF1AXP47813 144 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 KHKP50053 298 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 ACTBP60709 375 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 ACTG1P63261 375 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 B4GALNT1Q00973 533 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 AIMP2Q13155 320 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 GGTLC2Q14390 218 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 RPE65Q16518 533 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 PCGF3Q3KNV8 242 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC35D3Q5M8T2 416 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 MTFR2Q6P444 385 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 PLBD1Q6P4A8 553 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 ZCCHC12Q6PEW1 402 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 LCTLQ6UWM7 567 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 COMTD1Q86VU5 262 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 CLEC1AQ8NC01 280 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 OR2T27Q8NH04 317 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SNIP1Q8TAD8 396 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 SFXN5Q8TD22 340 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 ADAMTS17Q8TE56 1095 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 PAQR8Q8TEZ7 354 aa9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 FAM46AQ96IP4 442 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 NOL4LQ96MY1 436 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-204ENST00000409357 YPEL4Q96NS1 127 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms