RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ZNF346Q9UL40 294 aaKnown RBP9.29□□□□□ -0.92
RPAIN-204ENST00000405578 GPR52Q9Y2T5 361 aa9.29□□□□□ -0.92
RPAIN-204ENST00000405578 IER3IP1Q9Y5U9 82 aa9.29□□□□□ -0.92
RPAIN-204ENST00000405578 PCNX3Q9H6A9 2034 aa9.29□□□□□ -0.92
RPAIN-204ENST00000405578 H7C1Q1 480 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 M0R3G1 203 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ARHGEF9O43307 516 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 TRMUO75648 421 aaKnown RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 SOX14O95416 240 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 PPP1R3DO95685 299 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 PGA4P0DJD7 388 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 PGA3P0DJD8 388 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ANPEPP15144 967 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 NTF4P34130 210 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 UGT2B10P36537 528 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ZNF84P51523 738 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 RAD23AP54725 363 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ESRRGP62508 458 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 NKX6-1P78426 367 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ROR2Q01974 943 aaKnown RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 KRR1Q13601 381 aaKnown RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 FHL1Q13642 323 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 STK11Q15831 433 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 THEM4Q5T1C6 240 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 SFRP5Q5T4F7 317 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 FBXW10Q5XX13 1052 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 SLC27A4Q6P1M0 643 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 DNM1P34Q6PK57 102 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 KLHL17Q6TDP4 642 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 KLHL24Q6TFL4 600 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ZBTB49Q6ZSB9 765 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 BHLHA15Q7RTS1 189 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 P2RY8Q86VZ1 359 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 CXorf67Q86X51 503 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 CIARTQ8N365 385 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 SYT14Q8NB59 555 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ALKBH3Q96Q83 286 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 TSPAN32Q96QS1 320 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 CIB1Q99828 191 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 OR10A4Q9H209 315 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 EGLN3Q9H6Z9 239 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 SMURF2Q9HAU4 748 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 CRLF2Q9HC73 371 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 C8orf4Q9NR00 106 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 ADAM18Q9Y3Q7 739 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 MAGED1Q9Y5V3 778 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-204ENST00000405578 FREM3P0C091 2139 aa9.28□□□□□ -0.92
RPAIN-204ENST00000405578 TEX13CA0A0J9YWL9 993 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 PRSS37A4D1T9 235 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 TUBAL3A6NHL2 446 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 RIIAD1A6NNX1 92 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 RNF212BA8MTL3 300 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 SOCS2O14508 198 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 CASKO14936 926 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 SMAD7O15105 426 aaKnown RBP9.27□□□□□ -0.93
RPAIN-204ENST00000405578 UPK3AO75631 287 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 LYZL6O75951 148 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 TXNDC12O95881 172 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 RENP00797 406 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 HMGN1P05114 100 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 QDPRP09417 244 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF26P17031 533 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-204ENST00000405578 COX5AP20674 150 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 DAPP51397 102 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 MYBPC1Q00872 1141 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 FAM27E3Q08E93 113 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 DAG1Q14118 895 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 TRIP10Q15642 601 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 C1QTNF12Q5T7M4 302 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 SHEQ5VZ18 495 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 KDM4DQ6B0I6 523 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 STAC2Q6ZMT1 411 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 FAM122BQ7Z309 247 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 C17orf78Q8N4C9 275 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 CBR4Q8N4T8 237 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 C1orf162Q8NEQ5 155 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF519Q8TB69 540 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 FAM222BQ8WU58 562 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 MUCL1Q96DR8 90 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 PLEKHA8Q96JA3 519 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 Q96M85 177 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 SLC38A2Q96QD8 506 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 MRPL13Q9BYD1 178 aaKnown RBP9.27□□□□□ -0.93
RPAIN-204ENST00000405578 VCXQ9H320 206 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 MOV10Q9HCE1 1003 aaKnown RBP9.27□□□□□ -0.93
RPAIN-204ENST00000405578 NGBQ9NPG2 151 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 USE1Q9NZ43 259 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 KLHL21Q9UJP4 597 aa9.27□□□□□ -0.93
RPAIN-204ENST00000405578 SONP18583 2426 aaKnown RBP9.27□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF99A8MXY4 864 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-204ENST00000405578 PDLIM1O00151 329 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 BHLHE40O14503 412 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 EI24O14681 340 aa9.26□□□□□ -0.93
RPAIN-204ENST00000405578 DHHO43323 396 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms