RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZNF593O00488 134 aaPredicted RBP3.3□□□□□ -1.88
RTN4-208ENST00000404909 DNPH1O43598 174 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 AQP8O94778 261 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 ACTL6AO96019 429 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 IGHV3-9P01782 118 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 IGHA1P01876 353 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 QDPRP09417 244 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 SPARCP09486 303 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 CDAP32320 146 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 TTKP33981 857 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 CSNK1A1P48729 337 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 UCNP55089 124 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 WNT4P56705 351 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 OR12D2P58182 307 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 ADAM8P78325 824 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 TMED1Q13445 227 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 TP53I3Q53FA7 332 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 LIPKQ5VXJ0 399 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 FAM205BPQ63HN1 556 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 DNM1P34Q6PK57 102 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 UNQ6494/PRO21346Q6UXR6 183 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 TMPRSS11AQ6ZMR5 421 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 PLEKHG7Q6ZR37 379 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 Q6ZS92 163 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 SPATC1Q76KD6 591 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 SSX6Q7RTT6 188 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 HDDC2Q7Z4H3 204 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 KLBQ86Z14 1044 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 EXD3Q8N9H8 876 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 POMGNT2Q8NAT1 580 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 OR6X1Q8NH79 312 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 THEM6Q8WUY1 208 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 SPRYD4Q8WW59 207 aaPredicted RBP3.3□□□□□ -1.88
RTN4-208ENST00000404909 TMEM203Q969S6 136 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 ISOC1Q96CN7 298 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 C4orf36Q96KX1 117 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 ADAD1Q96M93 576 aaKnown RBP3.3□□□□□ -1.88
RTN4-208ENST00000404909 COG8Q96MW5 612 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 INTS14Q96SY0 518 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 CALHM2Q9HA72 323 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 FANCFQ9NPI8 374 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 NDUFA13Q9P0J0 144 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 RSL24D1Q9UHA3 163 aaKnown RBP3.3□□□□□ -1.88
RTN4-208ENST00000404909 LAMP5Q9UJQ1 280 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 COPS3Q9UNS2 423 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 PCDHGB7Q9Y5F8 929 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 ZFYVE26Q68DK2 2539 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 FREM1Q5H8C1 2179 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 GTF3C1Q12789 2109 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 CACNA1BQ00975 2339 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 RELNP78509 3460 aa3.3□□□□□ -1.88
RTN4-208ENST00000404909 IGLV1-36A0A0B4J1U3 117 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LOC100506127A0A0U1RQW1 187 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 A0A1B0GTH9 108 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TMEM129A0AVI4 362 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 MED19A0JLT2 244 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 NPIPB13A6NJU9 1138 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 NPIPB4C9JG80 1138 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 J3QRE1 110 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR2T7P0C7T2 308 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PGA4P0DJD7 388 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PGA3P0DJD8 388 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RGS6P49758 472 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ACTC1P68032 377 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ACTA1P68133 377 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GALEQ14376 348 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 THEM4Q5T1C6 240 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF322Q6U7Q0 402 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 NHLRC1Q6VVB1 395 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 AAED1Q7RTV5 226 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZBTB46Q86UZ6 589 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 P2RY8Q86VZ1 359 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 MCEMP1Q8IX19 187 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TUSC5Q8IXB3 177 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZIC4Q8N9L1 334 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 NOXO1Q8NFA2 376 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR2T27Q8NH04 317 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZCCHC14Q8WYQ9 949 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 MCHR2Q969V1 340 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 WDYHV1Q96HA8 205 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 DCUN1D5Q9BTE7 237 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CDADC1Q9BWV3 514 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RBM24Q9BX46 236 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 MRPL13Q9BYD1 178 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 RACGAP1Q9H0H5 632 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 EXOSC4Q9NPD3 245 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 GLTPQ9NZD2 209 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 KCNG2Q9UJ96 466 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GNG8Q9UK08 70 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 IKZF2Q9UKS7 526 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LHX6Q9UPM6 363 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 POLR1DQ9Y2S0 133 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LSM2Q9Y333 95 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 FLVCR1Q9Y5Y0 555 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ITPR1Q14643 2758 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 KALRNO60229 2985 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LOC102725191A0A1B0GVB3 256 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF716A6NP11 495 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LRRTM2O43300 516 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CYTIPO60759 359 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms