RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ARHGAP19Q14CB8 494 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 PIGGQ5H8A4 983 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 ANXA8L1Q5VT79 327 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 IGFL2Q6UWQ7 119 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF429Q86V71 674 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 LIX1Q8N485 282 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 OR7G2Q8NG99 324 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 GPR151Q8TDV0 419 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 CXorf40AQ8TE69 158 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 AURKBQ96GD4 344 aaPredicted RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 SLC35E1Q96K37 410 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 PRRC1Q96M27 445 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 TSNARE1Q96NA8 513 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 BPIFA3Q9BQP9 254 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 PLA2G2FQ9BZM2 168 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 ILKAPQ9H0C8 392 aaPredicted RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 CDC42EP4Q9H3Q1 356 aaKnown RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 ASB8Q9H765 288 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 EXO5Q9H790 373 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 PSME2Q9UL46 239 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 GTF3C1Q12789 2109 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 LTBP1Q14766 1721 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 ATRXP46100 2492 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 TRBV6-6A0A0A6YYG2 114 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 WRBO00258 174 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 EEDO75530 441 aaKnown RBP2.56□□□□□ -2
HMGB1P17-201ENST00000403495 AIFM1O95831 613 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 IGLV2-23P01705 113 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 ACSM4P0C7M7 580 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 IGHV3-43DP0DP04 118 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 MAS1LP35410 378 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 SERPINB5P36952 375 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 AQP2P41181 271 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CXCL5P42830 114 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 NMUP48645 174 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CRISP1P54107 249 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 SMARCB1Q12824 385 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 MADCAM1Q13477 382 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF658BQ4V348 819 aaPredicted RBP2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CYB5R2Q6BCY4 276 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 DNAJC24Q6P3W2 148 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 TMEM220Q6QAJ8 160 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 ANGPTL8Q6UXH0 198 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 SLC16A14Q7RTX9 510 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 SH2D6Q7Z4S9 175 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 MKXQ8IYA7 352 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CMTM1Q8IZ96 169 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 LINC01555Q8NAE3 123 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 OR51G1Q8NGK1 321 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 OR10G9Q8NGN4 311 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 OR4A4PQ8NGN8 299 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 ACTRT1Q8TDG2 376 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 NRGNQ92686 78 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 SLC38A4Q969I6 547 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CFAP53Q96M91 514 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CHP1Q99653 195 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 KCTD14Q9BQ13 255 aaPredicted RBP2.56□□□□□ -2
HMGB1P17-201ENST00000403495 MTG1Q9BT17 334 aaPredicted RBP2.56□□□□□ -2
HMGB1P17-201ENST00000403495 OSBPL10Q9BXB5 764 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 RACGAP1Q9H0H5 632 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 GEMIN7Q9H840 131 aaKnown RBP2.56□□□□□ -2
HMGB1P17-201ENST00000403495 RETNQ9HD89 108 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 CTPS2Q9NRF8 586 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF223Q9UK11 482 aaPredicted RBP2.56□□□□□ -2
HMGB1P17-201ENST00000403495 NFASCO94856 1347 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 PHLPP2Q6ZVD8 1323 aa2.56□□□□□ -2
HMGB1P17-201ENST00000403495 GLYATL1P3A0A0U1RQE8 302 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PRSS37A4D1T9 235 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PINLYPA6NC86 204 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 TRIM49D1C9J1S8 452 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 BOLA2-SMG1P6H3BVE0 249 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 L7N2F9 121 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CDC7O00311 574 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 LAD1O00515 517 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PEX7O00628 323 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 DYNC1I1O14576 645 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CASC3O15234 703 aaKnown RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 SLC31A2O15432 143 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CA11O75493 328 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CALM1P0DP23 149 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CALM2P0DP24 149 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CALM3P0DP25 149 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PSG2P11465 335 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 AK4P27144 223 aaPredicted RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 GTF2E2P29084 291 aaKnown RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 HRH1P35367 487 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 C21orf59P57076 290 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 SLC7A9P82251 487 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 SLC25A11Q02978 314 aaKnown RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PON3Q15166 354 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 TMEM183BQ1AE95 376 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 SPANXN2Q5MJ10 180 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 C9orf135Q5VTT2 229 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 REEP3Q6NUK4 255 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CLEC2AQ6UVW9 174 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 EIF3MQ7L2H7 374 aaKnown RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 TMEM183AQ8IXX5 376 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PRELID2Q8N945 189 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 FAM184AQ8NB25 1140 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 OR10R2Q8NGX6 335 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms