RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 HOXC4P09017 264 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 RORAP35398 523 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 BLKP51451 505 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 FBXW4P57775 412 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 EIF2B1Q14232 305 aaKnown RBP11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 NSDHLQ15738 373 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 CD163Q86VB7 1156 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 COMMD2Q86X83 199 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 CMIPQ8IY22 773 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 PDE7BQ9NP56 450 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 FBXL3Q9UKT7 428 aa11.89□□□□□ -0.51
HMBOX1-203ENST00000397358 SRPX2O60687 465 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 OPN1LWP04000 364 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 PLCXD2Q0VAA5 305 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 FZD2Q14332 565 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 C2orf68Q2NKX9 166 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 Q6ZS52 159 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 ATG4DQ86TL0 474 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 SLC43A2Q8N370 569 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 TTC9Q92623 222 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 ACSM4P0C7M7 580 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 MRPS10P82664 201 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 TAF13Q15543 124 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 VWA2Q5GFL6 755 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 MUC20Q8N307 709 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 FAM71CQ8NEG0 241 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 SEC22AQ96IW7 307 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 LRFN5Q96NI6 719 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 NMNAT2Q9BZQ4 307 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 SDHAF2Q9NX18 166 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 MRTO4Q9UKD2 239 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 FANCMQ8IYD8 2048 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 FITM1A5D6W6 292 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 GGT3PA6NGU5 568 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 TMEM212A6NML5 194 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 MPZL1O95297 269 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 RAB3DO95716 219 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 GIPP09681 153 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 AKAIN1P0CW23 69 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 APEHP13798 732 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 ZNF28P17035 718 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 ALOX5APP20292 161 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 S100A11P31949 105 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 NUP62P37198 522 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 SEC61A1P61619 476 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 KLHL26Q53HC5 615 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 B3GNTL1Q67FW5 361 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 TMUB2Q71RG4 321 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 RELL2Q8NC24 303 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 C15orf40Q8WUR7 153 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 PTDSS2Q9BVG9 487 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 ZCCHC4Q9H5U6 513 aa11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 NOP16Q9Y3C1 178 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-203ENST00000397358 SPTY2D1-AS1A0A0U1RR47 76 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ZNF823P16415 610 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 DRD1P21728 446 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ARHGDIBP52566 201 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 EGR4Q05215 589 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ACKR1Q16570 336 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 C17orf107Q6ZR85 190 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ZNF248Q8NDW4 579 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 SLC25A44Q96H78 314 aaPredicted RBP11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 DPYSL5Q9BPU6 564 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 PLEKHA6Q9Y2H5 1048 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 C2orf16Q68DN1 1984 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 IGHV5-51A0A0C4DH38 117 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 RPS10-NUDT3A0A1W2PQS6 291 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 MCRIP1C9JLW8 97 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 XRCC3O43542 346 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 CSF1P09603 554 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 RASGEF1BQ0VAM2 473 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 IL10RAQ13651 578 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 EXOSC6Q5RKV6 272 aaKnown RBP11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 SLC18B1Q6NT16 456 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 STEAP1BQ6NZ63 245 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ACBD4Q8NC06 268 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 CASTOR1Q8WTX7 329 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 C5orf34Q96MH7 638 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 TAS2R4Q9NYW5 299 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 PLCL2Q9UPR0 1127 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 NPIPB9F8W1W9 429 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 CTAG2O75638 210 aa11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
HMBOX1-203ENST00000397358 ITGA5P08648 1049 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms