RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PSMD4P55036 377 aaKnown RBP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 MFGE8Q08431 387 aaPredicted RBP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 SNTA1Q13424 505 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 MELKQ14680 651 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 C1orf189Q5VU69 101 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 TMEM205Q6UW68 189 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 CHMP1BQ7LBR1 199 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 FGD2Q7Z6J4 655 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 PLPP7Q8NBV4 271 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ADAMTS18Q8TE60 1221 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 DNASE2BQ8WZ79 361 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 LRFN5Q96NI6 719 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 MFRPQ9BY79 579 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 SCP2D1Q9UJQ7 156 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 FITM1A5D6W6 292 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ANXA2P2A6NMY6 339 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 H0YIG0 161 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 PDCD5O14737 125 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 CDC40O60508 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 IL33O95760 270 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 CD1AP06126 327 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ANXA2P07355 339 aaKnown RBP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ITGA5P08648 1049 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC25A1P53007 311 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 HSD11B2P80365 405 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ANGPT1Q15389 498 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 OR5M1Q8NGP8 315 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 OR8S1Q8NH09 359 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 MIB2Q96AX9 1013 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 CHST6Q9GZX3 395 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ELOVL3Q9HB03 270 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 GLTPQ9NZD2 209 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 SIT1Q9Y3P8 196 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 IGHV3-20A0A0C4DH32 117 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 H3BMH7 237 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 DUX1O43812 170 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 GIMD1P0DJR0 217 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 LCN1P31025 176 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 CAPZA2P47755 286 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 EPHA4P54764 986 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 IL10RAQ13651 578 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 GPR139Q6DWJ6 353 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 C9orf40Q8IXQ3 194 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC43A2Q8N370 569 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 CLDN23Q96B33 292 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 NUDT22Q9BRQ3 303 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 ZMAT3Q9HA38 289 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 NPTNQ9Y639 398 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 LOC101059948A0A1B0GTJ6 334 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 POM121CA8CG34 1229 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 I3L521 148 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 NUDT21O43809 227 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 LMX1BO60663 402 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 GLSO94925 669 aaPredicted RBP12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 DDAH2O95865 285 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 PNMTP11086 282 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 CCKBRP32239 447 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 EEF1A1P5Q5VTE0 462 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 COMMD7Q86VX2 200 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 OR4C16Q8NGL9 310 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 ADIPOR1Q96A54 375 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 CYYR1Q96J86 154 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 C7orf50Q9BRJ6 194 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 RAB33BQ9H082 229 aa12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 DUSP15Q9H1R2 295 aaPredicted RBP12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 MRPL22Q9NWU5 206 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-201ENST00000394456 ZDBF2Q9HCK1 2354 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 A0A1B0GVI7 797 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 BLACEA4D250 179 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 BGLAPP02818 100 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 GUSBP08236 651 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 SPARCP09486 303 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 CTLA4P16410 223 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 INSM1Q01101 510 aaPredicted RBP12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 HSF2Q03933 536 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 ISXQ2M1V0 245 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 SIGIRRQ6IA17 410 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 OR10K2Q6IF99 312 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 BAIAP2L2Q6UXY1 529 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 GLDNQ6ZMI3 551 aaPredicted RBP12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 PLXDC1Q8IUK5 500 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 CCDC28AQ8IWP9 274 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 GPR119Q8TDV5 335 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF721Q8TF20 911 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 TSEN15Q8WW01 171 aaKnown RBP12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 C4orf45Q96LM5 186 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 INTS14Q96SY0 518 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC19A3Q9BZV2 496 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 MOKQ9UQ07 419 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 MED12Q93074 2177 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 FREM3P0C091 2139 aa12.15□□□□□ -0.46
GTF2F1-201ENST00000394456 TRAV18A0A075B6X5 111 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 TRBV5-7A0A0A0MS05 114 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms