RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 FAM209AQ5JX71 171 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 HHATQ5VTY9 493 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 WDR93Q6P2C0 686 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-202ENST00000393773 DOK3Q7L591 496 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 DPPA2Q7Z7J5 298 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 SIGLECL1Q8N7X8 197 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 ICA1LQ8NDH6 482 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 IPCEF1Q8WWN9 437 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-202ENST00000393773 RAB1CQ92928 201 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 ELMOD3Q96FG2 381 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 TIMD4Q96H15 378 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 C1QTNF5Q9BXJ0 243 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM38AQ9H6F2 299 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 DECR2Q9NUI1 292 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
CHMP3-202ENST00000393773 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 SLAMF8Q9P0V8 285 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 ZSCAN5BA6NJL1 495 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 M0R3H8 397 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 TPD52L2O43399 206 aaKnown RBP13.02□□□□□ -0.33
CHMP3-202ENST00000393773 FMO6PO60774 539 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 UBOX5O94941 541 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 MT-ND5P03915 603 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 THY1P04216 161 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 AQP1P29972 269 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 MRPL19P49406 292 aaKnown RBP13.02□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF81P51508 661 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 HNRNPA0Q13151 305 aaKnown RBP13.02□□□□□ -0.33
CHMP3-202ENST00000393773 SCARB2Q14108 478 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 NPTX1Q15818 432 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF613Q6PF04 617 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 SLC16A14Q7RTX9 510 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF101Q8IZC7 436 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 BHLHE22Q8NFJ8 381 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-202ENST00000393773 SEPHS2Q99611 448 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 ARHGDIGQ99819 225 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 CENPHQ9H3R5 247 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 EVA1AQ9H8M9 152 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 ZMAT3Q9HA38 289 aaKnown RBP13.02□□□□□ -0.33
CHMP3-202ENST00000393773 SLCO1B3Q9NPD5 702 aa13.02□□□□□ -0.33
CHMP3-202ENST00000393773 LEF1Q9UJU2 399 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-202ENST00000393773 PPIAL4EA0A075B759 164 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 PPIAL4CA0A0B4J2A2 164 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 PPIAL4DF5H284 164 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 QDPRP09417 244 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 PPIAL4FP0DN26 164 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 PRTN3P24158 256 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 FPR2P25090 351 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ZFP36P26651 326 aaKnown RBP13.01□□□□□ -0.33
CHMP3-202ENST00000393773 MPV17P39210 176 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 WNT5AP41221 380 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 TREML4Q6UXN2 200 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 RETREG3Q86VR2 466 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 TSPYL5Q86VY4 417 aaPredicted RBP13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 FUNDC1Q8IVP5 155 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 LRRC17Q8N6Y2 441 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 RBM15BQ8NDT2 890 aaKnown RBP13.01□□□□□ -0.33
CHMP3-202ENST00000393773 CPEB3Q8NE35 698 aaKnown RBP13.01□□□□□ -0.33
CHMP3-202ENST00000393773 NOXO1Q8NFA2 376 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 OR1J1Q8NGS3 322 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 POP5Q969H6 163 aaKnown RBP13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ZBTB9Q96C00 473 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 DUX5Q96PT3 197 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF347Q96SE7 839 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF607Q96SK3 696 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 MCHR1Q99705 422 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF426Q9BUY5 554 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 RNF121Q9H920 327 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF229Q9UJW7 825 aa13.01□□□□□ -0.33
CHMP3-202ENST00000393773 IQCMA0A1B0GVH7 501 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 TMEM120BA0PK00 339 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 ISPDA4D126 451 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 RNF13O43567 381 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 OR6A2O95222 327 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 CH25HO95992 272 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 PTHP01270 115 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 IGHG1P01857 330 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 ADH4P08319 380 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 ASAH2BP0C7U1 165 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 DRD4P21917 467 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 PPIBP23284 216 aaKnown RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF133P52736 654 aaPredicted RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 PCBP3P57721 371 aaKnown RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 DEFA6Q01524 100 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 MOGQ16653 247 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 ARMCX4Q5H9R4 360 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 KLF17Q5JT82 389 aaPredicted RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 PAGE3Q5JUK9 113 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 SPATA46Q5T0L3 261 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 RFPL4BQ6ZWI9 263 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 HIPK4Q8NE63 616 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 GPR32P1Q8NGA4 272 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms