RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ATG16L2Q8NAA4 619 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 SYT14Q8NB59 555 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 NOXO1Q8NFA2 376 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 OR2T33Q8NG76 320 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 FANK1Q8TC84 345 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 PYDC1Q8WXC3 89 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 LRTOMTQ8WZ04 291 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 HDAC2Q92769 488 aaKnown RBP5.93□□□□□ -1.46
UBBP1-201ENST00000392399 MCHR2Q969V1 340 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 GTPBP3Q969Y2 492 aaKnown RBP5.93□□□□□ -1.46
UBBP1-201ENST00000392399 NMD3Q96D46 503 aaKnown RBP5.93□□□□□ -1.46
UBBP1-201ENST00000392399 RADILQ96JH8 1075 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 SAMD8Q96LT4 415 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 Q96M85 177 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 ERMAPQ96PL5 475 aaPredicted RBP5.93□□□□□ -1.46
UBBP1-201ENST00000392399 FOXB1Q99853 325 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 WACQ9BTA9 647 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 IFT27Q9BW83 186 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 TEX12Q9BXU0 123 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 VCX3BQ9H321 246 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 ESRP2Q9H6T0 727 aaKnown RBP5.93□□□□□ -1.46
UBBP1-201ENST00000392399 SIAEQ9HAT2 523 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 C8orf4Q9NR00 106 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 RASSF1Q9NS23 344 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 VSX1Q9NZR4 365 aaPredicted RBP5.93□□□□□ -1.46
UBBP1-201ENST00000392399 ENOPH1Q9UHY7 261 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 IER3IP1Q9Y5U9 82 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 SLC25A15Q9Y619 301 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
UBBP1-201ENST00000392399 TEX13CA0A0J9YWL9 993 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 SLC22A23A1A5C7 686 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 J3QL48 77 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 BHLHE40O14503 412 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 PPP1R3DO95685 299 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 RENP00797 406 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 HMGN1P05114 100 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 OSMP13725 252 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF23P17027 643 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 CDH2P19022 906 aaPredicted RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 PRKACGP22612 351 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 PTAFRP25105 342 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 VHLP40337 213 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 GIPRP48546 466 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 ESRRGP62508 458 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 MRPS34P82930 218 aaKnown RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TLE4Q04727 773 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 LGALS3BPQ08380 585 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TOP3AQ13472 1001 aaPredicted RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 KRR1Q13601 381 aaKnown RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TSC22D1Q15714 1073 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 MESTQ5EB52 335 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 C9orf135Q5VTT2 229 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 SLC27A4Q6P1M0 643 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 FAHD1Q6P587 224 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 DNM1P34Q6PK57 102 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF813Q6ZN06 617 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 C22orf34Q6ZV56 151 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 AMIGO2Q86SJ2 522 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 JAZF1Q86VZ6 243 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 WDFY1Q8IWB7 410 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 PQLC1Q8N2U9 271 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 PARP8Q8N3A8 854 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 LNX2Q8N448 690 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 SLC22A24Q8N4F4 322 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 WDR31Q8NA23 367 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 IL17RDQ8NFM7 739 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 OR52N5Q8NH56 324 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TEX47Q8TBZ9 253 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 NANOS1Q8WY41 292 aaKnown RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF837Q96EG3 531 aaPredicted RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 ZC3HAV1LQ96H79 300 aaKnown RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 NIPSNAP1Q9BPW8 284 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TSSK6Q9BXA6 273 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 KCNN2Q9H2S1 579 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 EGLN3Q9H6Z9 239 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TBC1D23Q9NUY8 699 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 TMEM38BQ9NVV0 291 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 KIF17Q9P2E2 1029 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 REV1Q9UBZ9 1251 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 NKX1-2Q9UD57 310 aaPredicted RBP5.92□□□□□ -1.46
UBBP1-201ENST00000392399 IL20RAQ9UHF4 553 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 KLHL21Q9UJP4 597 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 FBXL3Q9UKT7 428 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 EDARQ9UNE0 448 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 ADAM18Q9Y3Q7 739 aa5.92□□□□□ -1.46
UBBP1-201ENST00000392399 SPG11Q96JI7 2443 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 LRBAP50851 2863 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 A0A096LPE4 126 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.91□□□□□ -1.46
UBBP1-201ENST00000392399 A0A1W2PPZ6 126 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 DEFB108AA8MXU0 73 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 H0YJX3 145 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 H3BN98 237 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 SOCS2O14508 198 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 KHDRBS3O75525 346 aaKnown RBP5.91□□□□□ -1.46
UBBP1-201ENST00000392399 UBL3O95164 117 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 PTHP01270 115 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 IFNGP01579 166 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 IGKV3-15P01624 115 aa5.91□□□□□ -1.46
UBBP1-201ENST00000392399 HRGP04196 525 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms