RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 KIR3DL2P43630 455 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 MC2RQ01718 297 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 WDR38Q5JTN6 314 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 RHOUQ7L0Q8 258 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 RTL10Q7L3V2 364 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 ZNF321PQ8N8H1 164 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 CAMKVQ8NCB2 501 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 CMBLQ96DG6 245 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 LYRM4Q9HD34 91 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 CDV3Q9UKY7 258 aaKnown RBP16.32■□□□□ 0.2
ERCC2-201ENST00000391941 ERVK-19Q9WJR5 959 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 PLEKHA6Q9Y2H5 1048 aa16.32■□□□□ 0.2
ERCC2-201ENST00000391941 A0A087WUJ7 227 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 CDC14CA4D256 554 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 RUNX3Q13761 415 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 OR7A5Q15622 319 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 ALG10Q5BKT4 473 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 MESTQ5EB52 335 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 SLC43A2Q8N370 569 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 PXT1Q8NFP0 134 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
ERCC2-201ENST00000391941 CFHR5Q9BXR6 569 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 FBXO9Q9UK97 447 aaPredicted RBP16.31■□□□□ 0.2
ERCC2-201ENST00000391941 HMSDA8MTL9 139 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 KCNJ13O60928 360 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 ABHD16AO95870 558 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 AMY2AP04746 511 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 ZNF169Q14929 603 aaPredicted RBP16.31■□□□□ 0.2
ERCC2-201ENST00000391941 DMRTC1Q5HYR2 192 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 SLC35D3Q5M8T2 416 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 STEAP1BQ6NZ63 245 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 ZNF227Q86WZ6 799 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 TMEM185AQ8NFB2 350 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 STEAP2Q8NFT2 490 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 SLC22A18Q96BI1 424 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 CCDC3Q9BQI4 270 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 ZNF416Q9BWM5 594 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 ZNF471Q9BX82 626 aaPredicted RBP16.31■□□□□ 0.2
ERCC2-201ENST00000391941 RTN4RQ9BZR6 473 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 TMEM231Q9H6L2 316 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 HRASLS2Q9NWW9 162 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 SPACA6W5XKT8 324 aa16.31■□□□□ 0.2
ERCC2-201ENST00000391941 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 DMWDQ09019 674 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 UBXN2BQ14CS0 331 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 ITPRIPL2Q3MIP1 535 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 BEST3Q8N1M1 668 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 LPAR4Q99677 370 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 ZNF768Q9H5H4 540 aaKnown RBP16.3■□□□□ 0.2
ERCC2-201ENST00000391941 POLE3Q9NRF9 147 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 ARPC3O15145 178 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 MPZL1O95297 269 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 LDOC1O95751 146 aaPredicted RBP16.3■□□□□ 0.2
ERCC2-201ENST00000391941 ADH1BP00325 375 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 OR4E1P0C645 316 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 SRSF3P84103 164 aaKnown RBP16.3■□□□□ 0.2
ERCC2-201ENST00000391941 CBLN2Q8IUK8 224 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 KDM8Q8N371 416 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 PDCD10Q9BUL8 212 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 PRR13Q9NZ81 148 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 ETV7Q9Y603 341 aa16.3■□□□□ 0.2
ERCC2-201ENST00000391941 CT45A8P0DMV1 189 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 CT45A9P0DMV2 189 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 CSRP1P21291 193 aaKnown RBP16.29■□□□□ 0.2
ERCC2-201ENST00000391941 CALCRP30988 508 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 ATP1B3P54709 279 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 RPL18Q07020 188 aaKnown RBP16.29■□□□□ 0.2
ERCC2-201ENST00000391941 KIR2DS3Q14952 304 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 CT45A2Q5DJT8 189 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 AVL9Q8NBF6 648 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 PHOSPHO1Q8TCT1 267 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 PMM1Q92871 262 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 FAM3DQ96BQ1 224 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 RBM18Q96H35 190 aaKnown RBP16.29■□□□□ 0.2
ERCC2-201ENST00000391941 TSPAN32Q96QS1 320 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 FREM3P0C091 2139 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 TMEM235A6NFC5 223 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 FOXS1O43638 330 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 COL9A1P20849 921 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 MAOBP27338 520 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 AVPR2P30518 371 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 PRSS3P35030 304 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 STARP49675 285 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 GPR143P51810 404 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 EGR4Q05215 589 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 MFGE8Q08431 387 aaPredicted RBP16.29■□□□□ 0.2
ERCC2-201ENST00000391941 RIPPLY1Q0D2K3 151 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 C1orf61Q13536 156 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 SERTAD2Q14140 314 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 GUCA2BQ16661 112 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 OR52W1Q6IF63 320 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 DNM1P46Q6ZS02 220 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 MARCH3Q86UD3 253 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 GABRG1Q8N1C3 465 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 OR6N1Q8NGY5 312 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 C16orf52Q8NHV5 167 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 CASTOR1Q8WTX7 329 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 FAM46BQ96A09 425 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 SLC25A36Q96CQ1 311 aa16.29■□□□□ 0.2
ERCC2-201ENST00000391941 NRSN2Q9GZP1 204 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms