RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RLFQ13129 1914 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 SCN2AQ99250 2005 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PLXNA3P51805 1871 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 KDM3AQ9Y4C1 1321 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CEP295Q9C0D2 2601 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 DNAH1Q9P2D7 4330 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PIKFYVEQ9Y2I7 2098 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ALPK3Q96L96 1907 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PRR14LQ5THK1 2151 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 IGHV3-72A0A0B4J1Y9 119 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A0J9YVX5 310 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A0J9YX75 114 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A0J9YYE9 177 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM237BA0A1B0GVD1 139 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 C13orf42A0A1B0GVH6 325 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ATP6AP2A0A1C7CYW4 349 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TRBC2A0A5B9 178 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ARHGEF37A1IGU5 675 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ANKRD18BA2A2Z9 1011 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 IZUMO1RA6ND01 250 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR5H1A6NKK0 313 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF705FA8MVS1 300 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CDRT15L2A8MXV6 281 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NPIPA7E9PJI5 369 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TNFRSF11BO00300 401 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PTGESO14684 152 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ST8SIA3O43173 380 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PAPSS1O43252 624 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 AP5Z1O43299 807 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAPPC3O43617 180 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF737O75373 536 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TRIM3O75382 744 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 REM1O75628 298 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC22A5O76082 557 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SIX3O95343 332 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 IGSF6O95976 241 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 IGLV3-1P01715 115 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TRBC1P01850 177 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GAPDHP04406 335 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RPN2P04844 631 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ALDOBP05062 364 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CA3P07451 260 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NPIPA8P0DM63 369 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 AKR1B1P15121 316 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 EZRP15311 586 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SPNP16150 400 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CD36P16671 472 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ALOX5APP20292 161 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SERPINA2P20848 420 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 KITLGP21583 273 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CXCR2P25025 360 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ADSSP30520 456 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CD70P32970 193 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SOX6P35712 828 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TRIM23P36406 574 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 P2RY2P41231 377 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CCR2P41597 374 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GNPDA1P46926 289 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 KCNJ1P48048 391 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 HINT1P49773 126 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RORCP51449 518 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CDH13P55290 713 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FOXA3P55318 350 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CMC4P56277 68 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 HSD17B7P56937 341 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF121P58317 390 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PRAMEP78395 509 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CDK5Q00535 292 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 BDH1Q02338 343 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GBE1Q04446 702 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CALD1Q05682 793 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 DMTNQ08495 405 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GALNT1Q10472 559 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CETN1Q12798 172 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TCP10Q12799 353 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CHIT1Q13231 466 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GRM3Q14832 879 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PSMD6Q15008 389 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RAB35Q15286 201 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RGNQ15493 299 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR1C1Q15619 314 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF726P1Q15940 193 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FILIP1LQ4L180 1135 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 LUZP6Q538Z0 58 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ORMDL2Q53FV1 153 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TCHHL1Q5QJ38 904 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RNF187Q5TA31 235 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GDF5OSQ5U4N7 250 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GKAP1Q5VSY0 366 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR107Q5VW38 600 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PRAMEF8Q5VWM4 474 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PRAMEF7Q5VXH5 474 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TEX36Q5VZQ5 186 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TIGD3Q6B0B8 471 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NOXRED1Q6NXP6 359 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM154Q6P9G4 183 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PODNL1Q6PEZ8 512 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NCEH1Q6PIU2 408 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ARL9Q6T311 187 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 AFTPHQ6ULP2 937 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms