RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TGIF1Q15583 401 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 ALG11Q2TAA5 492 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 TMPRSS12Q86WS5 348 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 RSPRY1Q96DX4 576 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 XKR8Q9H6D3 395 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 CACFD1Q9UGQ2 172 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 TRAV18A0A075B6X5 111 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 TSPAN11A1L157 253 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC31A2O15432 143 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 NDUFS4O43181 175 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF208O43345 1280 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 OIP5O43482 229 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 CTAG2O75638 210 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 LYPD3O95274 346 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 CD5P06127 495 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 RAB5AP20339 215 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 PRSS3P35030 304 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 RBM34P42696 430 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 PYY3Q5JQD4 70 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 FIGNL1Q6PIW4 674 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 MAMDC2Q7Z304 686 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 BIVMQ86UB2 503 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 RNF166Q96A37 237 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 ZBTB8AQ96BR9 441 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 BPIFA2Q96DR5 249 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 MYADMQ96S97 322 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 TIMM10BQ9Y5J6 103 aa13.33□□□□□ -0.28
VPS9D1-201ENST00000389386 DOCK9Q9BZ29 2069 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 FEZF1A0PJY2 475 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 BLOC1S5-TXNDC5H3BN57 136 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 K7ESM1 405 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 WNT11O96014 354 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 CD2P06729 351 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 CLDN2P57739 230 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 ALKBH1Q13686 389 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 DHCR24Q15392 516 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 NCMAPQ5T1S8 102 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC43A2Q8N370 569 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 GLYATL1Q969I3 302 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 RHOVQ96L33 236 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 ACTRT3Q9BYD9 372 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 TUBA4BQ9H853 241 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 RPS10P5Q9NQ39 176 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 ADAM29Q9UKF5 820 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 ATXN7L1Q9ULK2 861 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 GAS6Q14393 721 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 C9orf64Q5T6V5 341 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 PRAMEF17Q5VTA0 474 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 FAM111BQ6SJ93 734 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF836Q6ZNA1 936 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF383Q8NA42 475 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 OR10H5Q8NGA6 315 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 CNRIP1Q96F85 164 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 MESP1Q9BRJ9 268 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 POTEKPQ9BYX7 375 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 PLAGL1Q9UM63 463 aa13.32□□□□□ -0.28
VPS9D1-201ENST00000389386 TRIOO75962 3097 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 TBC1D3EA0A087X179 549 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A1W2PS29 197 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 FAM157AC9JC47 383 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 MFNGO00587 321 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 RAB3DO95716 219 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 NDUFB7P17568 137 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 TRA2BP62995 288 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SSBP1Q04837 148 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 GGTLC2Q14390 218 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 DHRS11Q6UWP2 260 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 FRRS1Q6ZNA5 592 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 OR4K17Q8NGC6 315 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 GPX8Q8TED1 209 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 CPNE4Q96A23 557 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 MOAP1Q96BY2 351 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC35A4Q96G79 324 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 AIF1LQ9BQI0 150 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 IL36AQ9UHA7 158 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A0B4J2A0 478 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 hCG_1809904A0A1W2PP81 198 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A1W2PPH5 198 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A1W2PR64 198 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A1W2PRV1 198 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 PRRT4C9JH25 899 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 TERTO14746 1132 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 IFNGP01579 166 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 HLA-AP01891 365 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 ADH6P28332 368 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 GLP1RP43220 463 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 RAB5CP51148 216 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SCAND1P57086 179 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 TAS2R60P59551 318 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SKP2Q13309 424 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 OR4C11Q6IEV9 310 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 PARS2Q7L3T8 475 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC35F3Q8IY50 421 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms