RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZNF621Q6ZSS3 439 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 MKXQ8IYA7 352 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR5B3Q8NH48 314 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 RNF138Q8WVD3 245 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 IL22RA2Q969J5 263 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 SMIM10Q96HG1 83 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 RACGAP1Q9H0H5 632 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 CWH43Q9H720 699 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 RPF2Q9H7B2 306 aaKnown RBP3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 SLCO1B3Q9NPD5 702 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 HRASLS2Q9NWW9 162 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 LYARQ9NX58 379 aaKnown RBP3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 VANGL2Q9ULK5 521 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 GLYATL1P3A0A0U1RQE8 302 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 MRPS12O15235 138 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 FGFR1OPO95684 399 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 TSPAN13O95857 204 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZDHHC11BP0C7U3 371 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 MYL2P10916 166 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 HMOX2P30519 316 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 CDKN1BP46527 198 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 NUTF2P61970 127 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 GBE1Q04446 702 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 SF3A2Q15428 464 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 MRPL23Q16540 153 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 GUCA2BQ16661 112 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 ALKBH6Q3KRA9 238 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 VAX1Q5SQQ9 334 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 CCNJQ5T5M9 372 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 CYB5R2Q6BCY4 276 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 TWF2Q6IBS0 349 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 TTC23LQ6PF05 361 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 IQCKQ8N0W5 287 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 FBXL13Q8NEE6 735 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR10R2Q8NGX6 335 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 TSSK3Q96PN8 268 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR51M1Q9H341 326 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 UGT1A7Q9HAW7 530 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 UGT1A10Q9HAW8 530 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 UGT1A8Q9HAW9 530 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 KCNJ16Q9NPI9 418 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 ABCB10Q9NRK6 738 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 GPATCH2LQ9NWQ4 482 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 STOX2Q9P2F5 926 aaPredicted RBP3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 SCN2AQ99250 2005 aa3.66□□□□□ -1.82
RNU6-40P-201ENST00000384254 TRBV6-6A0A0A6YYG2 114 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 WI2-2373I1.2A0A1W2PRP0 233 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 LRRIQ4A6NIV6 560 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 HIDE1A8MVS5 230 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 NDUFAB1O14561 156 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 KMOO15229 486 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 DNAJB6O75190 326 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 SUPT3HO75486 399 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 CA11O75493 328 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 AIFM1O95831 613 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 BGLAPP02818 100 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 SFTPCP11686 197 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 MGMTP16455 207 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 UQCRFS1P47985 274 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 CKAP4Q07065 602 aaKnown RBP3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 TMEM183BQ1AE95 376 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 TTLL9Q3SXZ7 439 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNF658BQ4V348 819 aaPredicted RBP3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 PIGGQ5H8A4 983 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 Q6ZSR3 168 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ABHD13Q7L211 337 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 BIVMQ86UB2 503 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 TMEM183AQ8IXX5 376 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 GABRG1Q8N1C3 465 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 HSD17B11Q8NBQ5 300 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ACTRT1Q8TDG2 376 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 CD300LFQ8TDQ1 290 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 STARD8Q92502 1023 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 FAM3DQ96BQ1 224 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ASB9Q96DX5 294 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 SERPINB12Q96P63 405 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 DNTTIP1Q9H147 329 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNF629Q9UEG4 869 aaPredicted RBP3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 NFASCO94856 1347 aa3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 CENPJQ9HC77 1338 aaPredicted RBP3.65□□□□□ -1.83
RNU6-40P-201ENST00000384254 ATRXP46100 2492 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 SERTM2A0A1B0GWG4 89 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 FAM166BA8MTA8 275 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 PES1O00541 588 aaKnown RBP3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 CACNG3O60359 315 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 HUS1O60921 280 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 C6orf47O95873 294 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 SERPINA5P05154 406 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 ERCC1P07992 297 aaPredicted RBP3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 ACSM4P0C7M7 580 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 ADRB3P13945 408 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNF30P17039 623 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 MRPL19P49406 292 aaKnown RBP3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 UBE2AP49459 152 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 IRX3P78415 501 aaPredicted RBP3.64□□□□□ -1.83
RNU6-40P-201ENST00000384254 HMGCS1Q01581 520 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms