RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 FAM87AP0C7U9 286 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 SELENOPP49908 381 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 GLO1Q04760 184 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 OR6N2Q8NGY6 317 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 SPRYD4Q8WW59 207 aaPredicted RBP23.82■■□□□ 1.4
MSX1-201ENST00000382723 INTS14Q96SY0 518 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 COPS3Q9UNS2 423 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 KHDRBS3O75525 346 aaKnown RBP23.82■■□□□ 1.4
MSX1-201ENST00000382723 RPS27P42677 84 aaKnown RBP23.82■■□□□ 1.4
MSX1-201ENST00000382723 TSTQ16762 297 aaKnown RBP23.82■■□□□ 1.4
MSX1-201ENST00000382723 MEP1BQ16820 701 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 ZNF322Q6U7Q0 402 aaPredicted RBP23.82■■□□□ 1.4
MSX1-201ENST00000382723 OR6N1Q8NGY5 312 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 YIPF6Q96EC8 236 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 OPALINQ96PE5 141 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 CAB39Q9Y376 341 aaPredicted RBP23.82■■□□□ 1.4
MSX1-201ENST00000382723 ZNF407Q9C0G0 2248 aa23.82■■□□□ 1.4
MSX1-201ENST00000382723 AQP8O94778 261 aa23.81■■□□□ 1.4
MSX1-201ENST00000382723 MPZL1O95297 269 aa23.81■■□□□ 1.4
MSX1-201ENST00000382723 TMPRSS11AQ6ZMR5 421 aa23.81■■□□□ 1.4
MSX1-201ENST00000382723 RNF128Q8TEB7 428 aa23.81■■□□□ 1.4
MSX1-201ENST00000382723 SNRNP27Q8WVK2 155 aaKnown RBP23.81■■□□□ 1.4
MSX1-201ENST00000382723 MCHR2Q969V1 340 aa23.81■■□□□ 1.4
MSX1-201ENST00000382723 NMD3Q96D46 503 aaKnown RBP23.81■■□□□ 1.4
MSX1-201ENST00000382723 MRPL22Q9NWU5 206 aaKnown RBP23.81■■□□□ 1.4
MSX1-201ENST00000382723 RSL24D1Q9UHA3 163 aaKnown RBP23.81■■□□□ 1.4
MSX1-201ENST00000382723 MED19A0JLT2 244 aaPredicted RBP23.8■■□□□ 1.4
MSX1-201ENST00000382723 QDPRP09417 244 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 CD36P16671 472 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 NTF4P34130 210 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 CSNK1A1P48729 337 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 BLVRAP53004 296 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 TMEM123Q8N131 208 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 OR52N1Q8NH53 320 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 ISOC1Q96CN7 298 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 ING1Q9UK53 422 aaPredicted RBP23.8■■□□□ 1.4
MSX1-201ENST00000382723 KIAA1549Q9HCM3 1950 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 A0A1B0GVC2 190 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 MAGEB4O15481 346 aaPredicted RBP23.8■■□□□ 1.4
MSX1-201ENST00000382723 AKAP8O43823 692 aaKnown RBP23.8■■□□□ 1.4
MSX1-201ENST00000382723 NR4A1P22736 598 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 TGFBR2P37173 567 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 HIST3H3Q16695 136 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 RPUSD3Q6P087 351 aaKnown RBP23.8■■□□□ 1.4
MSX1-201ENST00000382723 DPY19L4Q7Z388 723 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 ZNF485Q8NCK3 441 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 ARHGAP9Q9BRR9 750 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 MARCH7Q9H992 704 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 GLTPQ9NZD2 209 aa23.8■■□□□ 1.4
MSX1-201ENST00000382723 AQP7O14520 342 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 ZNF432O94892 652 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 RGS6P49758 472 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 ADAM8P78325 824 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 LRFN4Q6PJG9 635 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 AAED1Q7RTV5 226 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 KLHDC2Q9Y2U9 406 aa23.79■■□□□ 1.4
MSX1-201ENST00000382723 A0A1B0GTH9 108 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PNMA8CA0A1B0GUJ8 204 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 A0A1W2PPL8 197 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 ZNF670-ZNF695F2Z2N8 137 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 J3QLW9 94 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 ZNF593O00488 134 aaPredicted RBP23.78■■□□□ 1.4
MSX1-201ENST00000382723 SCG5P05408 212 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PSKH1P11801 424 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 ZNF19P17023 458 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PTGS2P35354 604 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PHYHD1Q5SRE7 291 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 CDC20BQ86Y33 519 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 KLBQ86Z14 1044 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 GLB1L2Q8IW92 636 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 SNX33Q8WV41 574 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 TMEM54Q969K7 222 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 C4orf36Q96KX1 117 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 KLHL9Q9P2J3 617 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 LAMP5Q9UJQ1 280 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 CLEC4AQ9UMR7 237 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 LALBAP00709 142 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 OR12D2P58182 307 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 MLLT11Q13015 90 aaPredicted RBP23.78■■□□□ 1.4
MSX1-201ENST00000382723 SLC25A47Q6Q0C1 308 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 SLC26A10Q8NG04 563 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 FNDC8Q8TC99 324 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PNPLA2Q96AD5 504 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 YIPF3Q9GZM5 350 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PRDM14Q9GZV8 571 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 CXorf56Q9H5V9 222 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 PLSCR2Q9NRY7 297 aa23.78■■□□□ 1.4
MSX1-201ENST00000382723 SPARCP09486 303 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 HSF2Q03933 536 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 INAQ16352 499 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 LINC00303Q3SY05 128 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 TP53I3Q53FA7 332 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 P2RY8Q86VZ1 359 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 ZFP41Q8N8Y5 198 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 OR5M9Q8NGP3 310 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 SEC61A2Q9H9S3 476 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 RCE1Q9Y256 329 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 BOD1L1Q8NFC6 3051 aa23.77■■□□□ 1.4
MSX1-201ENST00000382723 CENPBD1B2RD01 187 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 PSMD9O00233 223 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms