RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 WISP1O95388 367 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 ELOA3BQ3SY89 546 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 ALG10Q5BKT4 473 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 TMUB2Q71RG4 321 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 SLC16A9Q7RTY1 509 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 EXD3Q8N9H8 876 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 ELOA3Q8NG57 546 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 SLITRK2Q9H156 845 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 GPN1Q9HCN4 374 aaPredicted RBP14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 PLCL2Q9UPR0 1127 aa14.72□□□□□ -0.05
NKX3-1-201ENST00000380871 SULT1B1O43704 296 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 SRPX2O60687 465 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 PRAMEF2O60811 474 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 IGF2P01344 180 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 S100A11P31949 105 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 EGR4Q05215 589 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 ZP2Q05996 745 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 ZNF74Q16587 644 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 MESTQ5EB52 335 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 ZNF563Q8TA94 476 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 PMM1Q92871 262 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 KTI12Q96EK9 354 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 LPAR4Q99677 370 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 NXF5Q9H1B4 397 aaKnown RBP14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 LAMP5Q9UJQ1 280 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 OR4C45A6NMZ5 311 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 DOK2O60496 412 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 HIST1H2ABP04908 130 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 GRK6P43250 576 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 DMWDQ09019 674 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 SLC35D2Q76EJ3 337 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 HIST3H2AQ7L7L0 130 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 OR2G2Q8NGZ5 317 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 THAP3Q8WTV1 239 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 HIST1H2ACQ93077 130 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 TWSG1Q9GZX9 223 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 SYT4Q9H2B2 425 aa14.71□□□□□ -0.05
NKX3-1-201ENST00000380871 RBBP9O75884 186 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 ITGA5P08648 1049 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CSRP1P21291 193 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 NUP62P37198 522 aaPredicted RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 IL10RAQ13651 578 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 GRM7Q14831 915 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC43A2Q8N370 569 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 EID2Q8N6I1 236 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 NSMAFQ92636 917 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 TMEM138Q9NPI0 162 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 GTF2A1LQ9UNN4 478 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CLDN16Q9Y5I7 305 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 TRAV18A0A075B6X5 111 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 TRBV5-5A0A0J9YX44 114 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 PPM1BO75688 479 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 SPDEFO95238 335 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CD3DP04234 171 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CD14P08571 375 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 SRFP11831 508 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 ZP3P21754 424 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CD27P26842 260 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 GPR3P46089 330 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 PRPS1P60891 318 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 SKP1P63208 163 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF595Q8IYB9 648 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 LRRC75AQ8NAA5 344 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 MRPL48Q96GC5 212 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 TSPAN32Q96QS1 320 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 DPYSL5Q9BPU6 564 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 KCNG2Q9UJ96 466 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 IGHV3-20A0A0C4DH32 117 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC22A23A1A5C7 686 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 EFCAB7A8K855 629 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 METTL12A8MUP2 240 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 H7C417 338 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CTAG2O75638 210 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 GTF2F2P13984 249 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 RPL18Q07020 188 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 RBMS2Q15434 407 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 CDC20BQ86Y33 519 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 PNPLA2Q96AD5 504 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 UTP23Q9BRU9 249 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 PPA2Q9H2U2 334 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 MYEF2Q9P2K5 600 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 MTFP1Q9UDX5 166 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 FBXL2Q9UKC9 423 aa14.7□□□□□ -0.06
NKX3-1-201ENST00000380871 GGT3PA6NGU5 568 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 SNRPGP15A8MWD9 76 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 XRCC3O43542 346 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 RP2O75695 350 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 NSA2O95478 260 aaKnown RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 IL5P05113 134 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 NME1P15531 152 aaKnown RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 BCKDHBP21953 392 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 KIR3DL2P43630 455 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 POU3F4P49335 361 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 CENPAP49450 140 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC6A19Q695T7 634 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 LRRN1Q6UXK5 716 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 C16orf47Q6ZP98 133 aaPredicted RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 RELL2Q8NC24 303 aaPredicted RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 C12orf10Q9HB07 376 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 MMP25Q9NPA2 562 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms