RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 IMMP1LQ96LU5 166 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 THAP7Q9BT49 309 aaPredicted RBP20.77■□□□□ 0.92
VPS16-201ENST00000380443 HDHD2Q9H0R4 259 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 PTGES2Q9H7Z7 377 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 TCF7L1Q9HCS4 588 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 SACM1LQ9NTJ5 587 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 PISDQ9UG56 409 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 CAMK2AQ9UQM7 478 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 V9GY05 133 aa20.77■□□□□ 0.92
VPS16-201ENST00000380443 ZNF28P17035 718 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 MMP15P51511 669 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 TEX30Q5JUR7 227 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 IL20RBQ6UXL0 311 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 OR2M3Q8NG83 312 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 RNF128Q8TEB7 428 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 SLC25A43Q8WUT9 341 aaPredicted RBP20.76■□□□□ 0.91
VPS16-201ENST00000380443 VDAC3Q9Y277 283 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 CPAMD8Q8IZJ3 1885 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 A0A087WZY1 265 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 HMX3A6NHT5 357 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 IFITM5A6NNB3 132 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 CTDSPLO15194 276 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 CCNKO75909 580 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 TPPPO94811 219 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 PAHP00439 452 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 CALCBP10092 127 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 TFPIP10646 304 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 CTLA4P16410 223 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 SCAND1P57086 179 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 ZNF57Q68EA5 555 aaPredicted RBP20.76■□□□□ 0.91
VPS16-201ENST00000380443 LRRN1Q6UXK5 716 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 DBX2Q6ZNG2 339 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 ZNF676Q8N7Q3 588 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 FADS6Q8N9I5 356 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 OR2Y1Q8NGV0 311 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 PMEPA1Q969W9 287 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 ARL5BQ96KC2 179 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 C4orf45Q96LM5 186 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 MRPL22Q9NWU5 206 aaKnown RBP20.76■□□□□ 0.91
VPS16-201ENST00000380443 SLCO1C1Q9NYB5 712 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 KCNG2Q9UJ96 466 aa20.76■□□□□ 0.91
VPS16-201ENST00000380443 PTRH2Q9Y3E5 179 aaKnown RBP20.76■□□□□ 0.91
VPS16-201ENST00000380443 TRBV5-7A0A0A0MS05 114 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 FAM240BA0A1B0GVZ2 78 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 A0A1W2PQ72 361 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 GPR171O14626 319 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 IMPDH2P12268 514 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 PTGS2P35354 604 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 HSF1Q00613 529 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 C3orf33Q6P1S2 294 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 SLC35D2Q76EJ3 337 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 ULBP3Q9BZM4 244 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 AKIRIN1Q9H9L7 192 aaPredicted RBP20.75■□□□□ 0.91
VPS16-201ENST00000380443 ELOVL3Q9HB03 270 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 SLC39A1Q9NY26 324 aa20.75■□□□□ 0.91
VPS16-201ENST00000380443 RPH3AQ9Y2J0 694 aaPredicted RBP20.75■□□□□ 0.91
VPS16-201ENST00000380443 ACOD1A6NK06 481 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 UMODP07911 640 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 FAM157BP0CG42 384 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 HLA-DMAP28067 261 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 SPEM2Q0P670 501 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 HDDC2Q7Z4H3 204 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 OR5H6Q8NGV6 325 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 HSD17B8Q92506 261 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 ZBTB8AQ96BR9 441 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 DNAJA3Q96EY1 480 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 KCNK17Q96T54 332 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 CMKLR1Q99788 373 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 MMP28Q9H239 520 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 PCDHGA9Q9Y5G4 932 aaKnown RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 GSTZ1O43708 216 aaPredicted RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 KHDRBS3O75525 346 aaKnown RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 KLF7O75840 302 aaPredicted RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 HRGP04196 525 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 COX6A1P12074 109 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 CCL4P13236 92 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 SNRPBP14678 240 aaKnown RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 ADAM8P78325 824 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 CBX3Q13185 183 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 MEP1BQ16820 701 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 PLA2G2CQ5R387 149 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 BICRALQ6AI39 1079 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 OR4K17Q8NGC6 315 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 POC1BQ8TC44 478 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 TRIM63Q969Q1 353 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 C5orf34Q96MH7 638 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 C7orf50Q9BRJ6 194 aaKnown RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 TSPAN10Q9H1Z9 355 aaPredicted RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 MOV10Q9HCE1 1003 aaKnown RBP20.74■□□□□ 0.91
VPS16-201ENST00000380443 KLHL9Q9P2J3 617 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 ETV7Q9Y603 341 aa20.74■□□□□ 0.91
VPS16-201ENST00000380443 SLC43A1O75387 559 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 AQP8O94778 261 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 SPARCP09486 303 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 ZNF806P0C7X5 589 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 IFNGR1P15260 489 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 ZNF823P16415 610 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 RIDAP52758 137 aaKnown RBP20.73■□□□□ 0.91
VPS16-201ENST00000380443 MELKQ14680 651 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 CSRP2Q16527 193 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms