RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 MED12LQ86YW9 2145 aa11.45□□□□□ -0.58
CBWD3-203ENST00000377344 SHANK1Q9Y566 2161 aa11.45□□□□□ -0.58
CBWD3-203ENST00000377344 IGLV1-36A0A0B4J1U3 117 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 OR6C65A6NJZ3 312 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 KHDRBS3O75525 346 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 GLCEO94923 617 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 GPANK1O95872 356 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 RPSAP08865 295 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 MRPL3P09001 348 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 EEF1B2P24534 225 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 GSTT1P30711 240 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CXCR4P61073 352 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CSNK2BP67870 215 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 GLO1Q04760 184 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 EIF2S3LQ2VIR3 472 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 SLC35D3Q5M8T2 416 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 LYPD4Q6UWN0 246 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 NCCRP1Q6ZVX7 275 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 POMGNT2Q8NAT1 580 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 OR51G2Q8NGK0 314 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 OR6K3Q8NGY3 331 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 ZFP3Q96NJ6 502 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 SEC61A2Q9H9S3 476 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 SLC7A10Q9NS82 523 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 WARS2Q9UGM6 360 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 PRSS50Q9UI38 385 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 BLOC1S6Q9UL45 172 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 TPRKBQ9Y3C4 175 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 DOCK7Q96N67 2140 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 ARHGAP21Q5T5U3 1957 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CCDC182A6NF36 153 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 TVP23AA6NH52 213 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 E9PLN8 166 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 TNFAIP8O95379 198 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CCDC159P0C7I6 412 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CRHBPP24387 322 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CEACAM8P31997 349 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 CA7P43166 264 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 OR3A2P47893 321 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 ROR2Q01974 943 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 FAPQ12884 760 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 GUSBP1Q15486 140 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 AHSA2Q719I0 299 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF511Q8NB15 262 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 KISS1RQ969F8 398 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 NMD3Q96D46 503 aaKnown RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 NR1H4Q96RI1 486 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-203ENST00000377344 VKORC1Q9BQB6 163 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 RACGAP1Q9H0H5 632 aa11.44□□□□□ -0.58
CBWD3-203ENST00000377344 SMG1Q96Q15 3661 aaKnown RBP11.43□□□□□ -0.58
CBWD3-203ENST00000377344 EIF4E1BA6NMX2 242 aaKnown RBP11.43□□□□□ -0.58
CBWD3-203ENST00000377344 B8ZZF3 427 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF587BE7ETH6 402 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 CCL21O00585 134 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 DHHO43323 396 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 TNFSF13O75888 250 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 CRHP06850 196 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 CDAP32320 146 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 NAA10P41227 235 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-203ENST00000377344 GUCA1AP43080 201 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF84P51523 738 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 CEACAM16Q2WEN9 425 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 C9orf135Q5VTT2 229 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 OTPQ5XKR4 325 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 SLC25A47Q6Q0C1 308 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 LINGO2Q7L985 606 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 BTLAQ7Z6A9 289 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 ERI1Q8IV48 349 aaKnown RBP11.43□□□□□ -0.58
CBWD3-203ENST00000377344 GLB1L2Q8IW92 636 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 STX19Q8N4C7 294 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 GGHQ92820 318 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-203ENST00000377344 LINC00470Q9BZP3 86 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 GPR35Q9HC97 309 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 PLCXD1Q9NUJ7 323 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 PSORS1C1Q9UIG5 152 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 PROCRQ9UNN8 238 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 MEMO1Q9Y316 297 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 COL6A6A6NMZ7 2263 aa11.43□□□□□ -0.58
CBWD3-203ENST00000377344 A0A0G2JNJ9 132 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 HSPB2A8KAH6 182 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 MPZL1O95297 269 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 STSP08842 583 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 BMP5P22003 454 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 CTSSP25774 331 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 LAP3P28838 519 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 HSPB2Q16082 182 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 KLHL22Q53GT1 634 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 C10orf128Q5T292 105 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 RIPPLY2Q5TAB7 128 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 LINC01590Q5TEZ4 76 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 FBXW9Q5XUX1 488 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 TMEM211Q6ICI0 200 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 TFAP2EQ6VUC0 442 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 OR4F15Q8NGB8 312 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms