RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 IDO2Q6ZQW0 420 aa22.87■■□□□ 1.25
C9orf40-201ENST00000376854 OR4C16Q8NGL9 310 aa22.87■■□□□ 1.25
C9orf40-201ENST00000376854 WDR89Q96FK6 387 aaPredicted RBP22.87■■□□□ 1.25
C9orf40-201ENST00000376854 GINS4Q9BRT9 223 aa22.87■■□□□ 1.25
C9orf40-201ENST00000376854 ELOVL3Q9HB03 270 aa22.87■■□□□ 1.25
C9orf40-201ENST00000376854 PDE7BQ9NP56 450 aa22.87■■□□□ 1.25
C9orf40-201ENST00000376854 A0A1W2PPC4 97 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 A0A1W2PPL8 197 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 C17orf51A8MQB3 221 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 TMEM150CB9EJG8 249 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 L7N2F9 121 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 IGLV3-19P01714 112 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 CSF1P09603 554 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 RRASP10301 218 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 NHLRC1Q6VVB1 395 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 TSLPQ969D9 159 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 SFXN2Q96NB2 322 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 FOXN4Q96NZ1 517 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 TAS2R8Q9NYW2 309 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 NFYAP23511 347 aaPredicted RBP22.86■■□□□ 1.25
C9orf40-201ENST00000376854 CCKBRP32239 447 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 CENPAP49450 140 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 CSRP2Q16527 193 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 MEP1BQ16820 701 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 SLC35D2Q76EJ3 337 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 ADIPOR1Q96A54 375 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 TPSD1Q9BZJ3 242 aa22.86■■□□□ 1.25
C9orf40-201ENST00000376854 PLGP00747 810 aaPredicted RBP22.85■■□□□ 1.25
C9orf40-201ENST00000376854 POU3F4P49335 361 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 RIPPLY1Q0D2K3 151 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.85■■□□□ 1.25
C9orf40-201ENST00000376854 OR4D10Q8NGI6 311 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 METTL21AQ8WXB1 218 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 SLC25A36Q96CQ1 311 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 CCDC120Q96HB5 630 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 OR8B4Q96RC9 309 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 NRSN2Q9GZP1 204 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 NUP50Q9UKX7 468 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 TRAV36DV7A0A075B6V5 113 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 UBE2QL1A1L167 161 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 CDC14CA4D256 554 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 NUDT14O95848 222 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 ITGA5P08648 1049 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 FBXO45P0C2W1 286 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 OR1D4P47884 311 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 GUCA2AQ02747 115 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 YOD1Q5VVQ6 348 aaPredicted RBP22.85■■□□□ 1.25
C9orf40-201ENST00000376854 FAM198BQ6UWH4 519 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 CHMP1BQ7LBR1 199 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 SLC36A1Q7Z2H8 476 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 MARCH3Q86UD3 253 aa22.85■■□□□ 1.25
C9orf40-201ENST00000376854 FITM1A5D6W6 292 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 SCO1O75880 301 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 RLN1P04808 185 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 CFPP27918 469 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 IL12BP29460 328 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 SLC17A1Q14916 467 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 FDX2Q6P4F2 183 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 C3P1Q6ZMU1 363 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 TTLL10Q6ZVT0 673 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 THRSPQ92748 146 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 MSANTD3Q96H12 275 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 TMPRSS13Q9BYE2 586 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 GTF2A1LQ9UNN4 478 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 B9D1Q9UPM9 204 aa22.84■■□□□ 1.25
C9orf40-201ENST00000376854 TRAV18A0A075B6X5 111 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 RAD1O60671 282 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 IGKV3-11P04433 115 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 ELOCQ15369 112 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 RAB11BQ15907 218 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 CHRDL2Q6WN34 429 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 ZNF721Q8TF20 911 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 OR1F2PQ96R84 312 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 KCNK15Q9H427 330 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 KCNN3Q9UGI6 736 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 SLC22A13Q9Y226 551 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 MMACHCQ9Y4U1 282 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 LILRA5A6NI73 299 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 B8ZZF3 427 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 MCRIP1C9JLW8 97 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 KDM4BO94953 1096 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 DDAH2O95865 285 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 DLX5P56178 289 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 C2orf76Q3KRA6 126 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 MAMDC2Q7Z304 686 aaPredicted RBP22.83■■□□□ 1.25
C9orf40-201ENST00000376854 BIVMQ86UB2 503 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 LMX1AQ8TE12 382 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.83■■□□□ 1.25
C9orf40-201ENST00000376854 ASB17Q8WXJ9 295 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 FAM3DQ96BQ1 224 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.83■■□□□ 1.25
C9orf40-201ENST00000376854 ZNF224Q9NZL3 707 aa22.83■■□□□ 1.25
C9orf40-201ENST00000376854 CACNA1IQ9P0X4 2223 aa22.83■■□□□ 1.24
C9orf40-201ENST00000376854 NUP210LQ5VU65 1888 aa22.83■■□□□ 1.24
C9orf40-201ENST00000376854 PRSS37A4D1T9 235 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 MEIS3P1A6NDR6 274 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 TLCD2A6NGC4 264 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 SLC25A12O75746 678 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 GTF2F2P13984 249 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 NKAIN2Q5VXU1 208 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms