RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SZRD1Q7Z422 152 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 MED20Q9H944 212 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 TMEM100Q9NV29 134 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 UPB1Q9UBR1 384 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF337Q9Y3M9 751 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 MUC22E2RYF6 1773 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 GLOD5A6NK44 160 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 CDK2P24941 298 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 GLP1RP43220 463 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 POU3F4P49335 361 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 DMWDQ09019 674 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 POU4F2Q12837 409 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 NFATC4Q14934 902 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF658BQ4V348 819 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 VWA2Q5GFL6 755 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 PRPF38BQ5VTL8 546 aaKnown RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 TMEM244Q5VVB8 128 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 UNQ6126/PRO20091Q6UXV3 157 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 NUDT13Q86X67 352 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SLC22A18ASQ8N1D0 253 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF433Q8N7K0 673 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 BBS10Q8TAM1 723 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SMPDL3AQ92484 453 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 HAVCR1Q96D42 359 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SAMD8Q96LT4 415 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 RPS10P5Q9NQ39 176 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 TRPC4Q9UBN4 977 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF230Q9UIE0 474 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 FBXL4Q9UKA2 621 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SLC17A4Q9Y2C5 497 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SNRNP200O75643 2136 aaKnown RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 TMEM72A0PK05 275 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 URADA6NGE7 173 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 FOXE1O00358 373 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 IFNA10P01566 189 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 MRPL3P09001 348 aaKnown RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SFTA3P0C7M3 94 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 HOXA6P31267 233 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 HSPB3Q12988 150 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 AIMP2Q13155 320 aaKnown RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SKP2Q13309 424 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 INPP5JQ15735 1006 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 KRBOX4Q5JUW0 171 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 NXPE4Q6UWF7 544 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 NDUFAF7Q7L592 441 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 SDR9C7Q8NEX9 313 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 DOK4Q8TEW6 326 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 LINC00615Q96LM1 132 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-203ENST00000375315 TEAD3Q99594 435 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 RHOFQ9HBH0 211 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 CBY1Q9Y3M2 126 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 CFAP54Q96N23 3096 aa11.06□□□□□ -0.64
C9orf3-203ENST00000375315 UNC13CQ8NB66 2214 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 KIAA1549LQ6ZVL6 1849 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 AVPR2P30518 371 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 PYY3Q5JQD4 70 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 NCMAPQ5T1S8 102 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 OR5M8Q8NGP6 311 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 OR10R2Q8NGX6 335 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 MAFAQ8NHW3 353 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-203ENST00000375315 OR14A2Q96R54 314 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 UBQLN3Q9H347 655 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 IL21RQ9HBE5 538 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 DMRT3Q9NQL9 472 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 ST6GALNAC2Q9UJ37 374 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-203ENST00000375315 FAM96BQ9Y3D0 163 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 HEATR5BQ9P2D3 2071 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 H7C417 338 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 EMC8O43402 210 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 RAB5AP20339 215 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 MPIP34949 423 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 RBM34P42696 430 aaKnown RBP11.05□□□□□ -0.64
C9orf3-203ENST00000375315 STXBP1P61764 594 aaKnown RBP11.05□□□□□ -0.64
C9orf3-203ENST00000375315 ACTC1P68032 377 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 ACTA1P68133 377 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 OR51S1Q8NGJ8 323 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 PHYHIPQ92561 330 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 SMIM19Q96E16 107 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 LAT2Q9GZY6 243 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 WSB2Q9NYS7 404 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-203ENST00000375315 MTFP1Q9UDX5 166 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 CACNA1EQ15878 2313 aa11.05□□□□□ -0.64
C9orf3-203ENST00000375315 CPSF4LA6NMK7 179 aaKnown RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 SULT2B1O00204 365 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 TCAPO15273 167 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 AKAIN1P0CW23 69 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 SRMP19623 302 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 TRHRP34981 398 aaPredicted RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 PPP1CAP62136 330 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 C21orf62-AS1Q17RA5 79 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 PWWP2BQ6NUJ5 590 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 HMGN2P46Q86SG4 172 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 OR5AP2Q8NGF4 316 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 OR52L1Q8NGH7 329 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 SNX33Q8WV41 574 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 KLHDC7BQ96G42 594 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms