RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CD1CP29017 333 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 RAB5CP51148 216 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 NAAAQ02083 359 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 SCGB2B2Q4G0G5 96 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 TFGQ92734 400 aaPredicted RBP18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 FOXRED1Q96CU9 486 aaPredicted RBP18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 Q96M85 177 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 TAAR9Q96RI9 348 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 CXorf65A6NEN9 183 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 FGF19O95750 216 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 HIST1H1CP16403 213 aaKnown RBP18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 PSMB5P28074 263 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 GLP1RP43220 463 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 POM121L1PQ3SYA9 428 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 ZNF227Q86WZ6 799 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 SLC43A2Q8N370 569 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 RPS4Y2Q8TD47 263 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 RRNAD1Q96FB5 475 aaKnown RBP18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 CHRDQ9H2X0 955 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 MYOZ1Q9NP98 299 aaPredicted RBP18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 POLE3Q9NRF9 147 aa18.7■□□□□ 0.58
TMEFF1-201ENST00000374879 TBC1D3EA0A087X179 549 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 URADA6NGE7 173 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 IFITM10A6NMD0 228 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 LYPD3O95274 346 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 TAS2R19P59542 299 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 ALG11Q2TAA5 492 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 Q499Y3 187 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 TMEM205Q6UW68 189 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 SLC35F3Q8IY50 421 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 FAM24BQ8N5W8 94 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 SLC16A11Q8NCK7 471 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 OR9A2Q8NGT5 310 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 CXorf40AQ8TE69 158 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 GPX8Q8TED1 209 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 ZDHHC5Q9C0B5 715 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 FARSAQ9Y285 508 aaKnown RBP18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 FAM157AC9JC47 383 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 MFNGO00587 321 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 OR1F1O43749 312 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 C8AP07357 584 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 SNRPNP63162 240 aaKnown RBP18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 SSX2Q16385 188 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 MACROD1Q9BQ69 325 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 AICDAQ9GZX7 198 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 PRDM13Q9H4Q3 707 aa18.69■□□□□ 0.58
TMEFF1-201ENST00000374879 TMEM72A0PK05 275 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 C7orf77A4D0Y5 90 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 IFNGP01579 166 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CSN2P05814 226 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 LPAR6P43657 344 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 RBP2P50120 134 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 DEFB103AP81534 67 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 HTRA3P83110 453 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 AWAT1Q58HT5 328 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CNKSR3Q6P9H4 555 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 UNQ6494/PRO21346Q6UXR6 183 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 ADIPOR2Q86V24 386 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 RANBP3LQ86VV4 465 aaPredicted RBP18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 OR13C8Q8NGS7 320 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 ADAMTS15Q8TE58 950 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CDS1Q92903 461 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 ATG4BQ9Y4P1 393 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 UNC80Q8N2C7 3258 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 TCF20Q9UGU0 1960 aaKnown RBP18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 A0A1W2PR48 441 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 ZNF735P0CB33 412 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CCR2P41597 374 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 FAM46CQ5VWP2 391 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 TRAPPC5Q8IUR0 188 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 OR5AR1Q8NGP9 310 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CYB5D2Q8WUJ1 264 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 SECTM1Q8WVN6 248 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CPNE4Q96A23 557 aaPredicted RBP18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 KIRREL1Q96J84 757 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 SMIM8Q96KF7 97 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 MESP1Q9BRJ9 268 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 C6orf106Q9H6K1 298 aaPredicted RBP18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 CDV3Q9UKY7 258 aaKnown RBP18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 VSIG4Q9Y279 399 aa18.68■□□□□ 0.58
TMEFF1-201ENST00000374879 FCGR3AP08637 254 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 HLA-GP17693 338 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 ZBTB25P24278 435 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 PSMB6P28072 239 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 GSK3AP49840 483 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 PPP1R1AQ13522 171 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 TMEM215Q68D42 235 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 KCTD9Q7L273 389 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 PPP1R3BQ86XI6 285 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 RAB7BQ96AH8 199 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 NKX3-1Q99801 234 aaPredicted RBP18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 C20orf24Q9BUV8 137 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 LGR4Q9BXB1 951 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 MTHFD2LQ9H903 347 aaPredicted RBP18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 FN3KRPQ9HA64 309 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 OR2S2Q9NQN1 319 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 HCFC1R1Q9NWW0 138 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 MED31Q9Y3C7 131 aa18.67■□□□□ 0.58
TMEFF1-201ENST00000374879 WDR45Q9Y484 360 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms