RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 SYS1Q8N2H4 156 aa16.5■□□□□ 0.23
RXRB-202ENST00000374685 ZNF441Q8N8Z8 693 aa16.5■□□□□ 0.23
RXRB-202ENST00000374685 OR10AC1Q8NH08 325 aa16.5■□□□□ 0.23
RXRB-202ENST00000374685 ZC3HAV1LQ96H79 300 aaKnown RBP16.5■□□□□ 0.23
RXRB-202ENST00000374685 ABHD1Q96SE0 405 aa16.5■□□□□ 0.23
RXRB-202ENST00000374685 SMLR1H3BR10 107 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 OGG1O15527 345 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 EIF4E2O60573 245 aaKnown RBP16.49■□□□□ 0.23
RXRB-202ENST00000374685 FZD7O75084 574 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 MPZL1O95297 269 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 CD3GP09693 182 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 PRSS45Q7RTY3 260 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 UBALD2Q8IYN6 164 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 OR10G3Q8NGC4 313 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 NSMAFQ92636 917 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 PPP1R14AQ96A00 147 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 MRPL39Q9NYK5 338 aaKnown RBP16.49■□□□□ 0.23
RXRB-202ENST00000374685 TO15178 435 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 LYRM1O43325 122 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 SLC19A2O60779 497 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 SC5DO75845 299 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 SERPINA3P01011 423 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 CCL4P13236 92 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 RRAS2P62070 204 aaPredicted RBP16.49■□□□□ 0.23
RXRB-202ENST00000374685 TRAM1Q15629 374 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 TRIM61Q5EBN2 209 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 PRAMEF20Q5VT98 475 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 TMEM81Q6P7N7 255 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 SLC16A9Q7RTY1 509 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 OR51A4Q8NGJ6 313 aa16.49■□□□□ 0.23
RXRB-202ENST00000374685 DACT3Q96B18 629 aaPredicted RBP16.49■□□□□ 0.23
RXRB-202ENST00000374685 TTC28Q96AY4 2481 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 PIN1P1O15428 100 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 ARL6IP5O75915 188 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 GRINAQ7Z429 371 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 MDGA2Q7Z553 956 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 TIGD4Q8IY51 512 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 LGALS14Q8TCE9 139 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 RGP1Q92546 391 aaPredicted RBP16.48■□□□□ 0.23
RXRB-202ENST00000374685 A8MVM7 634 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 ADRB1P08588 477 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 PRKAR1AP10644 381 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 FMODQ06828 376 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 LRRC28Q86X40 367 aaPredicted RBP16.48■□□□□ 0.23
RXRB-202ENST00000374685 ZNF676Q8N7Q3 588 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 ACOT12Q8WYK0 555 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 C5orf34Q96MH7 638 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 LRFN5Q96NI6 719 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 INTS14Q96SY0 518 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 METTL7AQ9H8H3 244 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 MED29Q9NX70 200 aa16.48■□□□□ 0.23
RXRB-202ENST00000374685 MRPL15Q9P015 296 aaKnown RBP16.48■□□□□ 0.23
RXRB-202ENST00000374685 RPS10-NUDT3A0A1W2PQS6 291 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 ZNF593O00488 134 aaPredicted RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 TSC22D2O75157 780 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 MAS1P04201 325 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 EPXP11678 715 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 CTLA4P16410 223 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 SRMP19623 302 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 GALP22466 123 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 CCKBRP32239 447 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 MRPL28Q13084 256 aaKnown RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 SQSTM1Q13501 440 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 GRK1Q15835 563 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 CLLU1Q5K131 121 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 TCEAL6Q6IPX3 200 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 OVCH1Q7RTY7 1134 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 ZBTB44Q8NCP5 570 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 DUSP18Q8NEJ0 188 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 AKAP1Q92667 903 aaKnown RBP eCLIP16.47■□□□□ 0.236e-10■■■■■ 35.1
RXRB-202ENST00000374685 TCEAL3Q969E4 200 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 FBXW5Q969U6 566 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 THAP7Q9BT49 309 aaPredicted RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 EMC6Q9BV81 110 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 IFT22Q9H7X7 185 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 FRRS1LQ9P0K9 344 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 TECTAO75443 2155 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 OR6C76A6NM76 312 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 PITPNBP48739 271 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 FOXF1Q12946 379 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 CPEB2Q7Z5Q1 589 aaKnown RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 NFAM1Q8NET5 270 aaPredicted RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 OR5AK2Q8NH90 309 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 MRPL48Q96GC5 212 aaKnown RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 SPSB2Q99619 263 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 WDR77Q9BQA1 342 aaPredicted RBP16.47■□□□□ 0.23
RXRB-202ENST00000374685 CYSLTR2Q9NS75 346 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 MCUBQ9NWR8 336 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 SLCO1C1Q9NYB5 712 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 ZNF281Q9Y2X9 895 aa16.47■□□□□ 0.23
RXRB-202ENST00000374685 A0A1W2PQD3 144 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 G3V3Y1 287 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 FBXO45P0C2W1 286 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 YOD1Q5VVQ6 348 aaPredicted RBP16.46■□□□□ 0.23
RXRB-202ENST00000374685 TPRA1Q86W33 373 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 EXD3Q8N9H8 876 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 MR1Q95460 341 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 KIAA1143Q96AT1 154 aaPredicted RBP16.46■□□□□ 0.23
RXRB-202ENST00000374685 SOSTQ9BQB4 213 aa16.46■□□□□ 0.23
RXRB-202ENST00000374685 ZNF879B4DU55 563 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms