RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CACNG2Q9Y698 323 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 V9GY05 133 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 NUP210LQ5VU65 1888 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 TRBV11-1A0A0K0K1C0 115 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 INMT-MINDY4F8WBC2 141 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 AIPO00170 330 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF593O00488 134 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 SLC16A7O60669 478 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 SLC43A1O75387 559 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 SLC6A1P30531 599 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 SOX2P48431 317 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 MMP15P51511 669 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 RAB25P57735 213 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 GABREP78334 506 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ZFP36L1Q07352 338 aaKnown RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 RNASE12Q5GAN4 147 aaKnown RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 UBE2NLQ5JXB2 153 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 BICRALQ6AI39 1079 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 C5orf46Q6UWT4 87 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 BAIAP2L2Q6UXY1 529 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ESPNLQ6ZVH7 1005 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 TOMM5Q8N4H5 51 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 NFAM1Q8NET5 270 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF417Q8TAU3 575 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 RGP1Q92546 391 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 CREB3L1Q96BA8 519 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF587Q96SQ5 575 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 TXNIPQ9H3M7 391 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ING1Q9UK53 422 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-202ENST00000374487 ITGB1BP2Q9UKP3 347 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 B9D1Q9UPM9 204 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 CAMK2AQ9UQM7 478 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 FKBP7Q9Y680 259 aa10.89□□□□□ -0.67
HMGCL-202ENST00000374487 A0A087WV48 116 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 PLPP3O14495 311 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 ABHD16AO95870 558 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 CD3GP09693 182 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 SRP9P49458 86 aaKnown RBP10.88□□□□□ -0.67
HMGCL-202ENST00000374487 BLVRAP53004 296 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 NTRK2Q16620 822 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 PPP1R3BQ86XI6 285 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 OR5L2Q8NGL0 311 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 OR2G2Q8NGZ5 317 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 OTOSQ8NHW6 89 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 NUBPLQ8TB37 319 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 FOXN4Q96NZ1 517 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 GALNT9Q9HCQ5 603 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 OCIAD1Q9NX40 245 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 KCNG2Q9UJ96 466 aa10.88□□□□□ -0.67
HMGCL-202ENST00000374487 A0A1B0GTH9 108 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ANKUB1A6NFN9 424 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 TMEM212A6NML5 194 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 TLX3O43711 291 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF432O94892 652 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 RASGEF1BQ0VAM2 473 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ODF4Q2M2E3 257 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF519Q8TB69 540 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ST8SIA1Q92185 356 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ITFG2Q969R8 447 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 CRB3Q9BUF7 120 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 TP63Q9H3D4 680 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 LIN7BQ9HAP6 207 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 SLCO1C1Q9NYB5 712 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 MRPL39Q9NYK5 338 aaKnown RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 KLRF1Q9NZS2 232 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 MED11Q9P086 117 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 VDAC3Q9Y277 283 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 RAXQ9Y2V3 346 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 TPRP12270 2363 aaKnown RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ANKRD61A6NGH8 418 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF354AO60765 605 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 TMEM127O75204 238 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 SPARCP09486 303 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 CCKBRP32239 447 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 DGCR2P98153 550 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 OTPQ5XKR4 325 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 SLC18B1Q6NT16 456 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 STAC2Q6ZMT1 411 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 SLC35D2Q76EJ3 337 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 FCRLAQ7L513 359 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 RAB11FIP2Q7L804 512 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 CPEB2Q7Z5Q1 589 aaKnown RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 IZUMO1Q8IYV9 350 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 CMTM4Q8IZR5 234 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 KDM8Q8N371 416 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 GPR148Q8TDV2 347 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ASB17Q8WXJ9 295 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ZCCHC14Q8WYQ9 949 aaKnown RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 YIPF5Q969M3 257 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 FYTTD1Q96QD9 318 aaKnown RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 GFI1Q99684 422 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 PISDQ9UG56 409 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 LOXL2Q9Y4K0 774 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms