RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ZNF227Q86WZ6 799 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 AMER3Q8N944 861 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 OR51L1Q8NGJ5 315 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 ADAMTS17Q8TE56 1095 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 GPX8Q8TED1 209 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 TGIF2Q9GZN2 237 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 NRSN2Q9GZP1 204 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 RHBGQ9H310 441 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 FN3KRPQ9HA64 309 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 PISDQ9UG56 409 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM265A0A087WTH1 108 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 A0A087X0M5 115 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.74□□□□□ -0.53
PRPF4-201ENST00000374198 A0A1B0GX30 115 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 DAOP14920 347 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 ST6GAL1P15907 406 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 MAOAP21397 527 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 LPAR6P43657 344 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 PRLHRP49683 370 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 GAS6Q14393 721 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM229BQ8NBD8 167 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 OR56A1Q8NGH5 318 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 OR51A7Q8NH64 312 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 BPIFA2Q96DR5 249 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 MISP3Q96FF7 219 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 A0A087WV48 116 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 GLOD5A6NK44 160 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 BCAT2O15382 392 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 DCNP07585 359 aaKnown RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 COX5BP10606 129 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 LIPCP11150 499 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ZBTB25P24278 435 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 NUBP1P53384 320 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 PKIAP61925 76 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 TMPRSS11FQ6ZWK6 438 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 LYG2Q86SG7 212 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 BIVMQ86UB2 503 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 SLC35F3Q8IY50 421 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CDK20Q8IZL9 346 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 OR56B1Q8NGI3 324 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 OR5B2Q96R09 309 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ADAM19Q9H013 955 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF443Q9Y2A4 671 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM184BQ9Y519 407 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 POMT1Q9Y6A1 747 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 EEF1E1-BLOC1S5C9J1V9 151 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 MOSPD3O75425 235 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ADH1CP00326 375 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CRHP06850 196 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CD1CP29017 333 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 PPICP45877 212 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 SOX2P48431 317 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF136P52737 540 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 PDX1P52945 283 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 KIAA0141Q14154 515 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 GGTLC2Q14390 218 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 Q499Y3 187 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 Q6ZVL8 140 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 HSD11B1LQ7Z5J1 315 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 C2orf73Q8N5S3 287 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CDV3Q9UKY7 258 aaKnown RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ADAM18Q9Y3Q7 739 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 A0A0G2JN53 185 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 OR10H2O60403 315 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ERAL1O75616 437 aaKnown RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 MAS1P04201 325 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 SLC2A1P11166 492 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 SNRPD1P62314 119 aaKnown RBP11.73□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM220Q6QAJ8 160 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 BTNL8Q6UX41 500 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 TGIF2LXQ8IUE1 241 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CCDC116Q8IYX3 515 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CCDC54Q8NEL0 328 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 MITD1Q8WV92 249 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 FGF13Q92913 245 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 SOX7Q9BT81 388 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 LGR4Q9BXB1 951 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 GPR174Q9BXC1 333 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 PRSS16Q9NQE7 514 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 INSL6Q9Y581 213 aa11.73□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3EA0A087X179 549 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 TVP23AA6NH52 213 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 M0R036 132 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 PSMD9O00233 223 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SRPX2O60687 465 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 MED6O75586 246 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 CKMP06732 381 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SLC6A9P48067 706 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms