RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 PCBD1P61457 104 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 RAB11AP62491 216 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 EEF1A2Q05639 463 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 SNTB1Q13884 538 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 ABHD17BQ5VST6 288 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 PRAMEF9Q5VWM5 478 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 OVCH1Q7RTY7 1134 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 FAM122AQ96E09 287 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 LYSMD1Q96S90 227 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 RNF167Q9H6Y7 350 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TAF9BQ9HBM6 251 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 LRIT1Q9P2V4 623 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 THAP10Q9P2Z0 257 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 HCFC2Q9Y5Z7 792 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 POMT1Q9Y6A1 747 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 ZAR1LA6NP61 321 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TRAF3IP2O43734 574 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 P2RX1P51575 399 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 F2RL1P55085 397 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 LIM2P55344 173 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 UBE2G2P60604 165 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 MANEAQ5SRI9 462 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 STEAP1BQ6NZ63 245 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TMEM64Q6YI46 380 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 RTN4RL1Q86UN2 441 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 C2CD4CQ8TF44 421 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 NUDT22Q9BRQ3 303 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 PTRH2Q9Y3E5 179 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 SULT1C4O75897 302 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 GLCEO94923 617 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 THBS1P07996 1170 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 SUMO1P63165 101 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 ZNF92Q03936 586 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TMEM106AQ96A25 262 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 PRR14Q9BWN1 585 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TM7SF3Q9NS93 570 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TMEM235A6NFC5 223 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 ATP1B1P05026 303 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 MAKP20794 623 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 PGFP49763 221 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 RNLSQ5VYX0 342 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 SEMA6CQ9H3T2 930 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 LOC100289279A0A1B0GTE1 492 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 OR1D4P47884 311 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 BTNL8Q6UX41 500 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 MED25Q71SY5 747 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 OLIG3Q7RTU3 272 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 FAM26EQ8N5C1 309 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CTRCQ99895 268 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 LYRM4Q9HD34 91 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
LMX1B-202ENST00000373474 TMED7-TICAM2A0A0A6YYA0 188 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 TRABD2BA6NFA1 517 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 SELENOFO60613 162 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 OPN1LWP04000 364 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A6P0DMU7 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A5P0DMU8 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A7P0DMV0 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A8P0DMV1 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A9P0DMV2 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 NAGAP17050 411 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CD38P28907 300 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 MEP1BQ16820 701 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A2Q5DJT8 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A1Q5HYN5 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 METRNLQ641Q3 311 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CT45A3Q8NHU0 189 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 DPF1Q92782 380 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 TMED7Q9Y3B3 224 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 A6NCN8 305 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 ARRDC5A6NEK1 342 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 TRAPPC2LH3BP13 241 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 ZNF385BQ569K4 471 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 AADACL3Q5VUY0 350 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
LMX1B-202ENST00000373474 PDXPQ96GD0 296 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 LCORQ96JN0 433 aaPredicted RBP13.07□□□□□ -0.32
LMX1B-202ENST00000373474 CITO14578 2027 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 MMP21Q8N119 569 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 ST8SIA2Q92186 375 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 PRELID3BQ9Y3B1 194 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 HCRTR1O43613 425 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 GPX5O75715 221 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 RAB5AP20339 215 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 TEAD1P28347 426 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 SHEQ5VZ18 495 aa13.07□□□□□ -0.32
LMX1B-202ENST00000373474 GAR1Q9NY12 217 aaKnown RBP13.07□□□□□ -0.32
LMX1B-202ENST00000373474 MYOTQ9UBF9 498 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms