RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PTH2RP49190 550 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 FLI1Q01543 452 aaPredicted RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SSBP1Q04837 148 aaKnown RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 DBPQ10586 325 aaPredicted RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 RBMS2Q15434 407 aaKnown RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 TGIF1Q15583 401 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF750Q32MQ0 723 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC6A19Q695T7 634 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 C6orf15Q6UXA7 325 aaPredicted RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 LRRN1Q6UXK5 716 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 THSD4Q6ZMP0 1018 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC36A1Q7Z2H8 476 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 TIPARPQ7Z3E1 657 aaKnown RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC35F2Q8IXU6 374 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC16A11Q8NCK7 471 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 OR13C2Q8NGS9 318 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 PFN4Q8NHR9 129 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SMAP2Q8WU79 429 aaPredicted RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 GAL3ST3Q96A11 431 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 MIB2Q96AX9 1013 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 ENKD1Q9H0I2 346 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SLITRK2Q9H156 845 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 CCDC86Q9H6F5 360 aaKnown RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 DUSP22Q9NRW4 184 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 C20orf141Q9NUB4 165 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 OPN4Q9UHM6 478 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 SRPK3Q9UPE1 567 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF281Q9Y2X9 895 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 HRH3Q9Y5N1 445 aa10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 KLF2Q9Y5W3 355 aaPredicted RBP10.39□□□□□ -0.75
TSPAN1-201ENST00000372003 A0A0A6YYC8 382 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 C4orf51C9J302 202 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 STMND1H3BQB6 276 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 I3L1I5 382 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 RAD1O60671 282 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 LPLP06858 475 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 KLK3P07288 261 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF888P0CJ79 500 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 C8orf89P0DMQ9 161 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 EDNRAP25101 427 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CERS1P27544 350 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CFPP27918 469 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 NOS3P29474 1203 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 OR1D4P47884 311 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 P2RX1P51575 399 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 ART1P52961 327 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 STX4Q12846 297 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 LINC00303Q3SY05 128 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 TMEM69Q5SWH9 247 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 RHBDD2Q6NTF9 364 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 RPTNQ6XPR3 784 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 SSX6Q7RTT6 188 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 OR7G2Q8NG99 324 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 OR13C5Q8NGS8 318 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 NT5CQ8TCD5 201 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 SNX33Q8WV41 574 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 PCNPQ8WW12 178 aaKnown RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CNOT9Q92600 299 aaKnown RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 MR1Q95460 341 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 PEX11GQ96HA9 241 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CXorf58Q96LI9 332 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF426Q9BUY5 554 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CHIAQ9BZP6 476 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 SPRY4Q9C004 299 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 ALX4Q9H161 411 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 BEX1Q9HBH7 125 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CA10Q9NS85 328 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 CLEC4AQ9UMR7 237 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 TMEM184BQ9Y519 407 aaPredicted RBP10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 KNTC1P50748 2209 aa10.38□□□□□ -0.75
TSPAN1-201ENST00000372003 WDFY3Q8IZQ1 3526 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 A0A087WV62 115 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 A0A0B4J203 849 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 GXYLT2A0PJZ3 443 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 F5H5P2 479 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 CTNSO60931 367 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF432O94892 652 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 PPP1R3DO95685 299 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 HPP00738 406 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 MELTFP08582 738 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 CSF1P09603 554 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 UBBP0CG47 229 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 UBCP0CG48 685 aaKnown RBP10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 ICAM2P13598 275 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 CD82P27701 267 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 AGTR1P30556 359 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 DIO1P49895 249 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 RPS27AP62979 156 aaKnown RBP10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 UBA52P62987 128 aaKnown RBP10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 MAT1AQ00266 395 aaKnown RBP10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 TNFRSF17Q02223 184 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF169Q14929 603 aaPredicted RBP10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 PON3Q15166 354 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 DUSP5Q16690 384 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 DEFB134Q4QY38 66 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 TP53I3Q53FA7 332 aa10.37□□□□□ -0.75
TSPAN1-201ENST00000372003 TMEM255AQ5JRV8 349 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms