RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TCEA1P23193 301 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 PPIFP30405 207 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 IFNA8P32881 189 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CAPGP40121 348 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RFC3P40938 356 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RBM34P42696 430 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 GPR4P46093 362 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CTBP2P56545 445 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 FXYD6P3P58550 94 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 IL1RL1Q01638 556 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 MERTKQ12866 999 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 FOXF1Q12946 379 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 NPRL3Q12980 569 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMEM44Q2T9K0 475 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PLPPR5Q32ZL2 321 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SLC36A3Q495N2 470 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SLC25A25Q6KCM7 469 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 DOK3Q7L591 496 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CCDC71Q8IV32 467 aaPredicted RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 CHERPQ8IWX8 916 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 IZUMO1Q8IYV9 350 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RNF113BQ8IZP6 322 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 FAM109AQ8N4B1 249 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 LINC00471Q8N535 108 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 DHRSXQ8N5I4 330 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 LRRC17Q8N6Y2 441 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 BEND2Q8NDZ0 799 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OR2M7Q8NG81 312 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OR4K17Q8NGC6 315 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PIGXQ8TBF5 258 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 GNPDA2Q8TDQ7 276 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 ST8SIA1Q92185 356 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TAAR8Q969N4 342 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 DNAJA3Q96EY1 480 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 JSRP1Q96MG2 331 aaPredicted RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 HS6ST2Q96MM7 605 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 UCK2Q9BZX2 261 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 FAM192AQ9GZU8 254 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RIBC2Q9H4K1 309 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SAP30LQ9HAJ7 183 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 C12orf10Q9HB07 376 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 VCX3AQ9NNX9 186 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 KLHL1Q9NR64 748 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 UBAP1Q9NZ09 502 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 ABI3Q9P2A4 366 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PAIP2BQ9ULR5 123 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 VDAC3Q9Y277 283 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMED7Q9Y3B3 224 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 ATMQ13315 3056 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 UNC119BA6NIH7 251 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 K7ENP7 123 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 NME2P1O60361 137 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PAGE4O60829 102 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 NPIPB7O75200 414 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CBR3O75828 277 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 WISP2O76076 250 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SOX14O95416 240 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CH25HO95992 272 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OPN1LWP04000 364 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CCDC159P0C7I6 412 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PNMTP11086 282 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CXCR1P25024 350 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 FPR3P25089 353 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 DPP4P27487 766 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SHC1P29353 583 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SLC15A1P46059 708 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CAPZA2P47755 286 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 MTNR1AP48039 350 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TNFSF10P50591 281 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 POLR2HP52434 150 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 CRISP1P54107 249 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 B3GALT5-AS1P59052 145 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CRYZQ08257 329 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 COX10Q12887 443 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TSPAN31Q12999 210 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PPA1Q15181 289 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 KRTCAP3Q53RY4 240 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMEM236Q5W0B7 351 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TTC33Q6PID6 262 aaPredicted RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMPRSS11FQ6ZWK6 438 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RRM2BQ7LG56 351 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SLC46A3Q7Z3Q1 461 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RNF144BQ7Z419 303 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 GRINAQ7Z429 371 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PARP8Q8N3A8 854 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OR8D4Q8NGM9 314 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OR1J4Q8NGS1 313 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 C2CD4CQ8TF44 421 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 CYGBQ8WWM9 190 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RAB40AQ8WXH6 277 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 BPIFA2Q96DR5 249 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SCMH1Q96GD3 660 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 C5orf34Q96MH7 638 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 ZNF570Q96NI8 536 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RDH12Q96NR8 316 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 MUS81Q96NY9 551 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TNFRSF13CQ96RJ3 184 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 FAM173AQ9BQD7 235 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMEM43Q9BTV4 400 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms