RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 PLA2G12AQ9BZM1 189 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 PARP12Q9H0J9 701 aaKnown RBP14.62□□□□□ -0.07
COL17A1-202ENST00000369733 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 FCMRO60667 390 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 PRSS23O95084 383 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 UTS2O95399 124 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 P04436 131 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 ZNF728P0DKX0 622 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 EPXP11678 715 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 ZNF74Q16587 644 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 POC1BQ8TC44 478 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 TGIF2Q9GZN2 237 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 EXO1Q9UQ84 846 aaKnown RBP14.62□□□□□ -0.07
COL17A1-202ENST00000369733 CD300LGQ6UXG3 332 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 WDR88Q6ZMY6 472 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 IL1F10Q8WWZ1 152 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 TAS2R4Q9NYW5 299 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 B4GALT7Q9UBV7 327 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 PHIPQ8WWQ0 1821 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 PRAMEF26H0Y7S4 382 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 DIO1P49895 249 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 GCDHQ92947 438 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-202ENST00000369733 WBP2Q969T9 261 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 SEMA4CQ9C0C4 833 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 DUSP22Q9NRW4 184 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 WSB2Q9NYS7 404 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-202ENST00000369733 OR4E1P0C645 316 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 MTCP1P56278 107 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 MOB3CQ70IA8 216 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 HIST2H3AQ71DI3 136 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM68Q96MH6 324 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 DNMT3BQ9UBC3 853 aaKnown RBP14.61□□□□□ -0.07
COL17A1-202ENST00000369733 PIAS3Q9Y6X2 628 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 TMED7-TICAM2A0A0A6YYA0 188 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 UPK1AO00322 258 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 RGS13O14921 159 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 LILRB5O75023 590 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 MT-CO2P00403 227 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 FGF9P31371 208 aaPredicted RBP14.61□□□□□ -0.07
COL17A1-202ENST00000369733 BSGP35613 385 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 SERPINF1P36955 418 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 SLC22A11Q9NSA0 550 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 KLK11Q9UBX7 282 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 TMED7Q9Y3B3 224 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 DUSP8Q13202 625 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 C8orf82Q6P1X6 216 aaPredicted RBP14.61□□□□□ -0.07
COL17A1-202ENST00000369733 GLIPR1L1Q6UWM5 242 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 NDRG3Q9UGV2 375 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 ADAM10O14672 748 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 NAT1P18440 290 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 CD80P33681 288 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 IRS1P35568 1242 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 OR1D4P47884 311 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 P2RX1P51575 399 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 ZNF266Q14584 549 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 METRNLQ641Q3 311 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 SIRT6Q8N6T7 355 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 LURAP1Q96LR2 239 aa14.61□□□□□ -0.07
COL17A1-202ENST00000369733 ABLIM3O94929 683 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 CD3DP04234 171 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 FOLR1P15328 257 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 CST5P28325 142 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-202ENST00000369733 DOC2BQ14184 412 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 ANGPTL5Q86XS5 388 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 LRFN5Q96NI6 719 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 ADAMTSL3P82987 1691 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 H3BQ06 376 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-202ENST00000369733 PSMB6P28072 239 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 RAB31Q13636 194 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 LINC00303Q3SY05 128 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM52BQ4KMG9 183 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 RSPO2Q6UXX9 243 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-202ENST00000369733 DCXRQ7Z4W1 244 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 OR2L13Q8N349 312 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 C19orf53Q9UNZ5 99 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-202ENST00000369733 URGCP-MRPS24S4R325 110 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 CIB4A0PJX0 185 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 MAN2B1O00754 1011 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 OGFOD3Q6PK18 319 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 STAC2Q6ZMT1 411 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 PIGCQ92535 297 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 TRAV1-2A0A0B4J238 106 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 TRIM77I1YAP6 450 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 BET1O15155 118 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 HCRTR1O43613 425 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 FZD6O60353 706 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 WNT3P56703 355 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 SGK3Q96BR1 496 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 UPRTQ96BW1 309 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 WDR89Q96FK6 387 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-202ENST00000369733 DERL3Q96Q80 235 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 A4GNTQ9UNA3 340 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 NUP205Q92621 2012 aa14.6□□□□□ -0.07
COL17A1-202ENST00000369733 A0A1W2PPV4 95 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 TRHRP34981 398 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 KIAA0040Q15053 153 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 C5orf46Q6UWT4 87 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 LRRC18Q8N456 261 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 HDAC8Q9BY41 377 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms