RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 GSTO2Q9H4Y5 243 aa11.15□□□□□ -0.63
GFRA1-203ENST00000369236 RHOFQ9HBH0 211 aa11.15□□□□□ -0.63
GFRA1-203ENST00000369236 TDRD6O60522 2096 aaKnown RBP11.15□□□□□ -0.63
GFRA1-203ENST00000369236 C8AP07357 584 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 NPY4RP50391 375 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 HEYLQ9NQ87 328 aaPredicted RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 SEC16AO15027 2179 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 KIR2DS1A0A191URI9 304 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TIMP2P16035 220 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 KIR2DS4P43632 304 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 NHLH1Q02575 133 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 NHLH2Q02577 135 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 IKZF1Q13422 519 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 KIR2DS1Q14954 304 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF626Q68DY1 528 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 NTMT1Q9BV86 223 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 B3GAT1Q9P2W7 334 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TMEM129A0AVI4 362 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 BMPR1BO00238 502 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 ABHD16AO95870 558 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 CD79AP11912 226 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 BMPR1AP36894 532 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 NOVA1P51513 510 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 EMP3P54852 163 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 RING1Q06587 406 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 BTNL3Q6UXE8 466 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF516Q92618 1163 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 SEH1LQ96EE3 360 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 MRPS28Q9Y2Q9 187 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 GPR171O14626 319 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 BLVRBP30043 206 aaPredicted RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 FCGR2CP31995 323 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TOMM34Q15785 309 aaPredicted RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TMEM201Q5SNT2 666 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 KNDC1Q76NI1 1749 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 OR2A1Q8NGT9 310 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 NMES1Q9C002 83 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TPRP12270 2363 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TRAV27A0A087WT01 109 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 FAM171A2A8MVW0 826 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 RNASEK-C17orf49H0YIS7 233 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 CHRM2P08172 466 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 GP2P55259 537 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 ADPRHL1Q8NDY3 354 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 IKZF4Q9H2S9 585 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF28P17035 718 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 APEX1P27695 318 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 BAP18Q8IXM2 172 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 OR2M3Q8NG83 312 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 F2RL3Q96RI0 385 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 MED16Q9Y2X0 877 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 FAM183AA6NL82 134 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 RAD1O60671 282 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 TBX19O60806 448 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 PTHLHP12272 177 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 XCR1P46094 333 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 MBOAT2Q6ZWT7 520 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 DPH7Q9BTV6 452 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 SLC35B3Q9H1N7 401 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 FLVCR2Q9UPI3 526 aa11.14□□□□□ -0.63
GFRA1-203ENST00000369236 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
GFRA1-203ENST00000369236 OR1Q1Q15612 314 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 CDC20BQ86Y33 519 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 C11orf42Q8N5U0 333 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 SLC22A12Q96S37 553 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF552Q9H707 407 aaPredicted RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 SCO1O75880 301 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 OR7C1O76099 320 aaPredicted RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 GPR174Q9BXC1 333 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 SIRT3Q9NTG7 399 aaPredicted RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 SUSD2Q9UGT4 822 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 MCTS1Q9ULC4 181 aaKnown RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 ATG2BQ96BY7 2078 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 C4orf47A7E2U8 309 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 ATXN1LP0C7T5 689 aaKnown RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 AREGP15514 252 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 VEGFAP15692 232 aaPredicted RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 SLC35A1P78382 337 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 PTPRCAPQ14761 206 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 COL5A1-AS1Q5SY13 56 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 NUMBLQ9Y6R0 609 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF860A6NHJ4 632 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 PMCHP20382 165 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 GLYATL3Q5SZD4 288 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 HMGN2P46Q86SG4 172 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 ZNF761Q86XN6 746 aaPredicted RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 PTRH1Q86Y79 214 aaKnown RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 POM121Q96HA1 1249 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
GFRA1-203ENST00000369236 OPN1MWP04001 364 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
GFRA1-203ENST00000369236 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms