RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 E7EQ34 232 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBL1XO60907 577 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBC1D3HP0C7X1 549 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBC1D3CQ6IPX1 549 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 SAMD7Q7Z3H4 446 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 ADGRE4PQ86SQ3 457 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBC1D3Q8IZP1 549 aaPredicted RBP3.46□□□□□ -1.85
SYNE1-207ENST00000367255 SMOQ99835 787 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TBL2Q9Y4P3 447 aaKnown RBP3.46□□□□□ -1.85
SYNE1-207ENST00000367255 ADAP1O75689 374 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 LIPCP11150 499 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 ACTR1AP61163 376 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 CCSMST1Q4G0I0 132 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 YIPF7Q8N8F6 280 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 OR5H2Q8NGV7 314 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM30AQ9NV96 361 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 KCNS2Q9ULS6 477 aa3.46□□□□□ -1.85
SYNE1-207ENST00000367255 ODAMA1E959 279 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 C6orf47O95873 294 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LANCL3Q6ZV70 420 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CMTM4Q8IZR5 234 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 AMER3Q8N944 861 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PTPN18Q99952 460 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 EMC9Q9Y3B6 208 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CBLP22681 906 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR5I1Q13606 314 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OPCMLQ14982 345 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF286AQ9HBT8 521 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OBP2AQ9NY56 170 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LTBP3Q9NS15 1303 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 POM121BA6NF01 834 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 MEIS2O14770 477 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 AK4P27144 223 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF296Q8WUU4 475 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CSF3RQ99062 836 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LIN7CQ9NUP9 197 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CNTRLQ7Z7A1 2325 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ANKRD66B4E2M5 251 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SIRPB1O00241 398 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 HPNP05981 417 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 POLR2HP52434 150 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 FBXW5Q969U6 566 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 GRHPRQ9UBQ7 328 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PTGDR2Q9Y5Y4 395 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SERTM2A0A1B0GWG4 89 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 HTR1AP08908 422 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 HTR1DP28221 377 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 YBX1P67809 324 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NPY5RQ15761 445 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM268Q5VZI3 342 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 FJX1Q86VR8 437 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LRRC25Q8N386 305 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR9A1PQ8NGU1 263 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SURF4O15260 269 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 MALLQ13021 153 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SGCAQ16586 387 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 MICBQ29980 383 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC30A6Q6NXT4 461 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ADTRPQ96IZ2 230 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LHX6Q9UPM6 363 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 H0YL77 283 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SAP18O00422 153 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 DDAH2O95865 285 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 GRB2P62993 217 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 THEM4Q5T1C6 240 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NRG4Q8WWG1 115 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 BIRC7Q96CA5 298 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SNRNP25Q9BV90 132 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SMPXQ9UHP9 88 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TBC1D3IA0A087WXS9 549 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CTSSP25774 331 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ELK4P28324 431 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 IGFBP7Q16270 282 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR2AJ1Q8NGZ0 328 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 VSTM2AQ8TAG5 236 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 UBALD1Q8TB05 177 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 FRZBQ92765 325 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TEAD3Q99594 435 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LTB4R2Q9NPC1 389 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR10H1Q9Y4A9 318 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ITGB1BP1O14713 200 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC31A1O15431 190 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF823P16415 610 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CSNK2A1P68400 391 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SIRPAP78324 504 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ACKR1Q16570 336 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 FAM151BQ6UXP7 276 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CFAP77Q6ZQR2 320 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SSBP4Q9BWG4 385 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZBTB20Q9HC78 741 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC39A9Q9NUM3 307 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PHF1O43189 567 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 HNRNPKP61978 463 aaKnown RBP eCLIP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 JAGN1Q8N5M9 183 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SMIM14Q96QK8 99 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 STRADBQ9C0K7 418 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 GDE1Q9NZC3 331 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR52A1Q9UKL2 312 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 RAMP1O60894 148 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms