RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 LILRA1O75019 489 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PRSS23O95084 383 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SNAP29O95721 258 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IGHMP01871 453 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ADRA2AP08913 450 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FAM157CP0CG43 387 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 DAP3P51398 398 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CLRN1P58418 232 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MRPS34P82930 218 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MYBPC1Q00872 1141 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LIPEQ05469 1076 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ELFN2Q5R3F8 820 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PODNL1Q6PEZ8 512 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CBLL1Q75N03 491 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TSEN54Q7Z6J9 526 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ARPINQ7Z6K5 226 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 VTCN1Q7Z7D3 282 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SYT14Q8NB59 555 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HDAC2Q92769 488 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 NABP1Q96AH0 204 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 BPIFA2Q96DR5 249 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TPD52L3Q96J77 140 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HOPXQ9BPY8 73 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SIAEQ9HAT2 523 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SMURF2Q9HAU4 748 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.74□□□□□ -0.535e-7■■■□□ 15.9
TNFRSF1A-202ENST00000366159 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IGLV3-9A0A075B6K5 115 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 J3KTA2 159 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LMX1BO60663 402 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FARS2O95363 451 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 APEHP13798 732 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF250P15622 560 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MAKP20794 623 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IGFBP5P24593 272 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF84P51523 738 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RPS23P62266 143 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 GALK2Q01415 458 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PRKCDQ05655 676 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TAF11Q15544 211 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC36A2Q495M3 483 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC25A47Q6Q0C1 308 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HACD2Q6Y1H2 254 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HDDC2Q7Z4H3 204 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC30A7Q8NEW0 376 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 UBASH3BQ8TF42 649 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LZICQ8WZA0 190 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SYT3Q9BQG1 590 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MYLK2Q9H1R3 596 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TPK1Q9H3S4 243 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 C1orf198Q9H425 327 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 REV1Q9UBZ9 1251 aa11.73□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LOC100289279A0A1B0GTE1 492 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC22A23A1A5C7 686 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MCIDASD6RGH6 385 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LYNX1G3V0Z9 82 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 M0R233 179 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CXCR6O00574 342 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CCDC22O60826 627 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC2A10O95528 541 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HPXP02790 462 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ERCC1P07992 297 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LYNX1P0DP58 116 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IFI30P13284 250 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CCL2P13500 99 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IL2RGP31785 369 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 THBS2P35442 1172 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 YAP1P46937 504 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC7A2P52569 658 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SEC24CP53992 1094 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RPL27P61353 136 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CARTPTQ16568 116 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IQCCQ4KMZ1 466 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ALG10Q5BKT4 473 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 GKAP1Q5VSY0 366 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TMEM53Q6P2H8 277 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RNF113BQ8IZP6 322 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FAM156AQ8NDB6 213 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CPEB3Q8NE35 698 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF519Q8TB69 540 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HPS1Q92902 700 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 EFCAB1Q9HAE3 211 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RHCGQ9UBD6 479 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ABCD2Q9UBJ2 740 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF346Q9UL40 294 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FZR1Q9UM11 496 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FBN3Q75N90 2809 aa11.72□□□□□ -0.53
TNFRSF1A-202ENST00000366159 A0A087WUU8 490 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LRP5LA4QPB2 252 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PTHP01270 115 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IFNA2P01563 188 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms