RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 HDHD2Q9H0R4 259 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ABRACLQ9P1F3 81 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 RPS6KB2Q9UBS0 482 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ERVK-19Q9WJR5 959 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 TMEM184BQ9Y519 407 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 WDR87Q6ZQQ6 2873 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CACNA1IQ9P0X4 2223 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 FAM90A20PA6NIJ5 464 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 A6NIN4 97 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 TTC36A6NLP5 189 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CLDN4O14493 209 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 IMPA2O14732 288 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 C1QBP02746 253 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 SPI1P17947 270 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 MAOAP21397 527 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 FASLGP48023 281 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 BLKP51451 505 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 MMP15P51511 669 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 GBX2P52951 348 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 HSD17B7P56937 341 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 PON3Q15166 354 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF684Q5T5D7 378 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 LINC01590Q5TEZ4 76 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 PARGQ86W56 976 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 OR6C4Q8NGE1 309 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 ZFAND1Q8TCF1 268 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 ZPLD1Q8TCW7 415 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 HSD17B8Q92506 261 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 NECTIN4Q96NY8 510 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CCNL2Q96S94 520 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 MAP3K3Q99759 626 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 TTTY10Q9BZA0 68 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 ABCG5Q9H222 651 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 NIPAL2Q9H841 368 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 ACOXLQ9NUZ1 547 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 WSB2Q9NYS7 404 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 COPS3Q9UNS2 423 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CACNG2Q9Y698 323 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 B4DGG1 531 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 EEF1E1O43324 174 aaKnown RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 UBL3O95164 117 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 NAA10P41227 235 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CAPZBP47756 277 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 MAZP56270 477 aaKnown RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CLRN1P58418 232 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 PRPS1P60891 318 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 NNATQ16517 81 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 SEM1Q6ZVN7 128 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 ASB18Q6ZVZ8 466 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 LRRC75AQ8NAA5 344 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 OR4D9Q8NGE8 314 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 OIT3Q8WWZ8 545 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 YIPF5Q969M3 257 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 CMTM3Q96MX0 182 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 OR10A2Q9H208 303 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 PRDM13Q9H4Q3 707 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 UNKLQ9H9P5 680 aaKnown RBP6.6□□□□□ -1.35
CLCN3-202ENST00000360642 UCK1Q9HA47 277 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 KLHL1Q9NR64 748 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 MCUBQ9NWR8 336 aa6.6□□□□□ -1.35
CLCN3-202ENST00000360642 DMDP11532 3685 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 TRBV2A0A0J9YWF9 115 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 SELENOFO60613 162 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 ARL6IP5O75915 188 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 GCH1P30793 250 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 SRP9P49458 86 aaKnown RBP6.59□□□□□ -1.35
CLCN3-202ENST00000360642 HSF2Q03933 536 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 LGALS3BPQ08380 585 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 FAM122BQ7Z309 247 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 ATG4DQ86TL0 474 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF440Q8IYI8 595 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 EXD3Q8N9H8 876 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 PHYHIPQ92561 330 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 LMF1Q96S06 567 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 GTPBP2Q9BX10 602 aaKnown RBP6.59□□□□□ -1.35
CLCN3-202ENST00000360642 GPR174Q9BXC1 333 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 GALNT9Q9HCQ5 603 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 RPRD1BQ9NQG5 326 aaKnown RBP6.59□□□□□ -1.35
CLCN3-202ENST00000360642 C2orf42Q9NWW7 574 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 ANKRD10Q9NXR5 420 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 SPATA2Q9UM82 520 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 MAU2Q9Y6X3 613 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 A0A1B0GTQ1 180 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 A0A1W2PPK0 400 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 C7orf66A4D0T2 115 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 C2CD4DB7Z1M9 353 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 CTDSPLO15194 276 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 PIN1P1O15428 100 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 FLRT2O43155 660 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 GLCEO94923 617 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 EVI2BP34910 448 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 RPL4P36578 427 aaKnown RBP6.59□□□□□ -1.35
CLCN3-202ENST00000360642 NUDT1P36639 197 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 PGDP52209 483 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 CD226Q15762 336 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 GXYLT1Q4G148 440 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 Q6ZS52 159 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 PLCZ1Q86YW0 608 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 SDR16C5Q8N3Y7 309 aa6.59□□□□□ -1.35
CLCN3-202ENST00000360642 OR51Q1Q8NH59 317 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms