RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TBX4P57082 545 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 RPS13P62277 151 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 RBX1P62877 108 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 FNDC3BQ53EP0 1204 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 GKN2Q86XP6 184 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 CPEB3Q8NE35 698 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 ASB11Q8WXH4 323 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 ACTR3CQ9C0K3 210 aaPredicted RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 SLC25A18Q9H1K4 315 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 STEAP1Q9UHE8 339 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 KCNG2Q9UJ96 466 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 TRBV5-4A0A0C4DH59 114 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 TVP23AA6NH52 213 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 ITGB1BP1O14713 200 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 KLF4O43474 513 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 NTN1O95631 604 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 F11P03951 625 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 F13BP05160 661 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 CD1AP06126 327 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 MRPL3P09001 348 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 NDUFV2P19404 249 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 NR0B2Q15466 257 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 C14orf28Q4W4Y0 310 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 GGNBP1Q5YKI7 109 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 ZNF280BQ86YH2 543 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 CLEC1AQ8NC01 280 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 OR2L8Q8NGY9 312 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 RRNAD1Q96FB5 475 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 MRGPRX3Q96LB0 322 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 SAMD8Q96LT4 415 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 HIST1H2BLQ99880 126 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 SLC6A16Q9GZN6 736 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 IL17BQ9UHF5 180 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 SLC22A31A6NKX4 558 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 LRP3O75074 770 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 VNN2O95498 520 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 QDPRP09417 244 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 OR8U9P0C7N5 309 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 EIF5AL1Q6IS14 154 aaKnown RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 ZNF529Q6P280 563 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 ZNF585AQ6P3V2 769 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 COMMD6Q7Z4G1 85 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 BIVMQ86UB2 503 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 OR8U1Q8NH10 309 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 RNASEH2CQ8TDP1 164 aaKnown RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 DVL3Q92997 716 aaPredicted RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 SYNPO2LQ9H987 977 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 CHTOPQ9Y3Y2 248 aaKnown RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 A0A0D9SEW6 157 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 A0A1W2PQH9 124 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 PRAMEF27A3QJZ7 478 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 PAPLNO95428 1278 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 HLA-AP01891 365 aaKnown RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 APLNRP35414 380 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 PPICP45877 212 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 TAS2R41P59536 307 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 PIP5KL1Q5T9C9 394 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 LYPLAL1Q5VWZ2 237 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 FOXRED2Q8IWF2 684 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 MMP21Q8N119 569 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 ZSCAN4Q8NAM6 433 aaPredicted RBP14.31□□□□□ -0.12
RTN3-205ENST00000356000 OR13D1Q8NGV5 346 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 CAMK1GQ96NX5 476 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 RNF126Q9BV68 326 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 SCRT1Q9BWW7 348 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 ADGRL4Q9HBW9 690 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 CUTCQ9NTM9 273 aa14.31□□□□□ -0.12
RTN3-205ENST00000356000 TP53I11O14683 189 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 CLTBP09497 229 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 GPR4P46093 362 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 TAS2R50P59544 299 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 GUCA2AQ02747 115 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 DUSP5Q16690 384 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 SLC35F3Q8IY50 421 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 DND1Q8IYX4 353 aaKnown RBP14.3□□□□□ -0.12
RTN3-205ENST00000356000 ACOT4Q8N9L9 421 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 MRGPRX4Q96LA9 322 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 GAL3ST4Q96RP7 486 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 POTEKPQ9BYX7 375 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 SLC25A31Q9H0C2 315 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 PRM3Q9NNZ6 103 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 MMP24Q9Y5R2 645 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 UMAD1C9J7I0 102 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 RPN2P04844 631 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 CSF2RAP15509 400 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 PCSK1P29120 753 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 PPM1AP35813 382 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 SOX8P57073 446 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 SSBP1Q04837 148 aaKnown RBP14.3□□□□□ -0.12
RTN3-205ENST00000356000 CNTN1Q12860 1018 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 TRA2AQ13595 282 aaKnown RBP eCLIP14.3□□□□□ -0.123e-6■□□□□ 8.6
RTN3-205ENST00000356000 MAJINQ3KP22 176 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 MOGAT2Q3SYC2 334 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 THOC6Q86W42 341 aaKnown RBP14.3□□□□□ -0.12
RTN3-205ENST00000356000 NAXEQ8NCW5 288 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms