RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 UBE2J1Q9Y385 318 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 SULT1B1O43704 296 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 GP1BBP13224 206 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 G0S2P27469 103 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 SGCAQ16586 387 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 OR10K2Q6IF99 312 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM71Q6P5X7 295 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 MBOAT2Q6ZWT7 520 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF417Q8TAU3 575 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 LINC00615Q96LM1 132 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 OCSTAMPQ9BR26 566 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 PIGQQ9BRB3 760 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 URM1Q9BTM9 101 aaKnown RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 PI3P19957 117 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 RAB5CP51148 216 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 TAS2R19P59542 299 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 ST3GAL2Q16842 350 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 RASD2Q96D21 266 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 MRGPRX1Q96LB2 322 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 MRPS17Q9Y2R5 130 aaKnown RBP12.89□□□□□ -0.35
SREBF1-202ENST00000355815 FBXO7Q9Y3I1 522 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF236Q9UL36 1845 aa12.89□□□□□ -0.35
SREBF1-202ENST00000355815 SMCO3A2RU48 225 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 P2RX6O15547 441 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 IGHA2P01877 340 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CSF2RBP32927 897 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 RFX2P48378 723 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CLEC12BQ2HXU8 276 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 C9orf152Q5JTZ5 239 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 UBE2NLQ5JXB2 153 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 OR1M1Q8NGA1 313 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 SCN5AQ14524 2016 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 ANKRD36A6QL64 1941 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 A0A0A6YYD5 115 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 APBB3O95704 486 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 FABP1P07148 127 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 DNM1P34Q6PK57 102 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CA5BP1Q8WTZ4 195 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
SREBF1-202ENST00000355815 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 VSX1Q9NZR4 365 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-202ENST00000355815 LRIT1Q9P2V4 623 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 POMT2Q9UKY4 750 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 VDAC3Q9Y277 283 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 A0A0J9YY10 115 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 TLX3O43711 291 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CELA2BP08218 269 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CPEP16870 476 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 EPHA1P21709 976 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 NRG3P56975 720 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 PPA1Q15181 289 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 TUSC1Q2TAM9 212 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM151BQ8IW70 566 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 OR5D18Q8NGL1 313 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 FNDC9Q8TBE3 224 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 PHOSPHO2Q8TCD6 241 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 TRMT61AQ96FX7 289 aaKnown RBP12.88□□□□□ -0.35
SREBF1-202ENST00000355815 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF281Q9Y2X9 895 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 H3BML4 177 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 SYT5O00445 386 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 LY86O95711 162 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 RAB40ALP0C0E4 278 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF136P52737 540 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CLEC9AQ6UXN8 241 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CRIPAKQ8N1N5 446 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 FAM174AQ8TBP5 190 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 RAB40AQ8WXH6 277 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 CLCC1Q96S66 551 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 PIGMQ9H3S5 423 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 HRASLSQ9HDD0 168 aa12.88□□□□□ -0.35
SREBF1-202ENST00000355815 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CDC42EP2O14613 210 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 DHPSP49366 369 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 GPR143P51810 404 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 MRPS10P82664 201 aaKnown RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 TSEN54Q7Z6J9 526 aaKnown RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CMTM4Q8IZR5 234 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ELP5Q8TE02 316 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 Q96M85 177 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 TEAD3Q99594 435 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 TEX101Q9BY14 249 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ING1Q9UK53 422 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CENPVL1A0A0U1RR11 272 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms