RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 OR51B4Q9Y5P0 310 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 FKBP2P26885 142 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 RPS23P62266 143 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 TEKQ02763 1124 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 DPTQ07507 201 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 LACC1Q8IV20 430 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 MFRPQ9BY79 579 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 ZMAT3Q9HA38 289 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 RAB22AQ9UL26 194 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 NDRG4Q9ULP0 352 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 A0A0D9SG52 128 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 LOC100289279A0A1B0GTE1 492 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 TCRBV5S1A1TA0A578 114 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 CNIH1O95406 144 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 ZNF133P52736 654 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 ARL16Q0P5N6 197 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 KHDC1LQ5JSQ8 128 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 RFPL4BQ6ZWI9 263 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 KIRREL1Q96J84 757 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 RTL8AQ9BWD3 113 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 NECAP2Q9NVZ3 263 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 COPS3Q9UNS2 423 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 SSUH2Q9Y2M2 353 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 ETV7Q9Y603 341 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 M0QYG6 137 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 EDIL3O43854 480 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 NXPH3O95157 252 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 GPX2P18283 190 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 BATF2Q8N1L9 274 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 SLC35G3Q8N808 338 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 OR6M1Q8NGM8 313 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 HEYLQ9NQ87 328 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 C19orf53Q9UNZ5 99 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 KLF13Q9Y2Y9 288 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 MICAL3Q7RTP6 2002 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 IL2RAP01589 272 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 OR8G1Q15617 311 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 STEAP1BQ6NZ63 245 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 BCORP1Q8N888 145 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 DVL3Q92997 716 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 OR5M11Q96RB7 305 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 NTNG1Q9Y2I2 539 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 SCAF4O95104 1147 aaKnown RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 PMPCAQ10713 525 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 EBPQ15125 230 aaKnown RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 ZNF468Q5VIY5 522 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 OVCH1Q7RTY7 1134 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 ANGPTL5Q86XS5 388 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 ZFP82Q8N141 532 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 LOXL2Q9Y4K0 774 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 UBL3O95164 117 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 SNAPINO95295 136 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 MMP11P24347 488 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 SLC19A1P41440 591 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 NPBWR1P48145 328 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 CCR5P51681 352 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 RPL11P62913 178 aaKnown RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 HSF1Q00613 529 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 CPEB3Q8NE35 698 aaKnown RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 BSCL2Q96G97 398 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-202ENST00000355480 TRIB1Q96RU8 372 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 GNB4Q9HAV0 340 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 CHST11Q9NPF2 352 aa16.54■□□□□ 0.24
COL18A1-202ENST00000355480 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 POM121CA8CG34 1229 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 HS3ST1O14792 307 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 RELAQ04206 551 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 TMEM207Q6UWW9 146 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 ANKRD12Q6UB98 2062 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 A0A1W2PR48 441 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 SLC16A6O15403 523 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 SELEP16581 610 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 CD22P20273 847 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 GALEQ14376 348 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 MAVSQ7Z434 540 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 DRAXINQ8NBI3 349 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 MRGPRX1Q96LB2 322 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 IP6K3Q96PC2 410 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 SHARPINQ9H0F6 387 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 KLK4Q9Y5K2 254 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 PPIAP62937 165 aaKnown RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 RBM45Q8IUH3 476 aaKnown RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 NKAIN4Q8IVV8 208 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 FAM213BQ8TBF2 198 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 SAT2Q96F10 170 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 FAM212BQ9NTI7 297 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 SLC39A9Q9NUM3 307 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 ATP23Q9Y6H3 246 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 E9PI62 339 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 TGM6O95932 706 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 ST6GAL1P15907 406 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 PHLDA2Q53GA4 152 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 TMEM217Q8N7C4 229 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 BAHD1Q8TBE0 780 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-202ENST00000355480 KCNJ15Q99712 375 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 CRLF2Q9HC73 371 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 EMC7Q9NPA0 242 aa16.53■□□□□ 0.24
COL18A1-202ENST00000355480 SRMP19623 302 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 CLINT1Q14677 625 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms