RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ZNF93P35789 620 aaPredicted RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 GPR17Q13304 367 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 DACT2Q5SW24 774 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 RANBP10Q6VN20 620 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 TOMM40LQ969M1 308 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 WDR34Q96EX3 536 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 DOCK8Q8NF50 2099 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 IGKV6D-41A0A0C4DH26 115 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 STBD1O95210 358 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 GPX3P22352 226 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 DLX2Q07687 328 aaPredicted RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 SLC10A6Q3KNW5 377 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SLC36A2Q495M3 483 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ZNF534Q76KX8 674 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 VRK2Q86Y07 508 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 LINC01599Q8WXQ3 324 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 DMRT3Q9NQL9 472 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PRTFDC1Q9NRG1 225 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 NDRG2Q9UN36 371 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 TMEM225BP0DP42 221 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 EVX2Q03828 476 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ALKBH1Q13686 389 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 AANATQ16613 207 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 NKPD1Q17RQ9 610 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PRAMEF18Q5VWM3 479 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 CFAP52Q8N1V2 620 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 RNF2Q99496 336 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ZNF230Q9UIE0 474 aaPredicted RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 NKX2-1P43699 371 aaPredicted RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 MKXQ8IYA7 352 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ACVR1CQ8NER5 493 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SLC24A4Q8NFF2 622 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 RNASEK-C17orf49H0YIS7 233 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 OR8U8P0C7N1 319 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 GM2AP17900 193 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 HTRA3P83110 453 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 IHHQ14623 411 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 OR8G1Q15617 311 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 OR52W1Q6IF63 320 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ZNRF4Q8WWF5 429 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 F2RL3Q96RI0 385 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 BARHL1Q9BZE3 327 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SRRQ9GZT4 340 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PRSS16Q9NQE7 514 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 HNF1BP35680 557 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 CSKP41240 450 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 RGMBQ6NW40 437 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 OR4C16Q8NGL9 310 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 FIGNL2A6NMB9 653 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SLC38A8A6NNN8 435 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 M0R1X1 148 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 CD96P40200 585 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 RPL29P47914 159 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 DOK3Q7L591 496 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PWWP2AQ96N64 755 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PADI3Q9ULW8 664 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 MMACHCQ9Y4U1 282 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 LOC105369274A0A096LPK9 316 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 TMEM269A0A1B0GVZ9 245 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 CLDN7O95471 211 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 FCGR2AP12318 317 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 RABIFP47224 123 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 HNRNPKP61978 463 aaKnown RBP eCLIP7.42□□□□□ -1.22
HTT-201ENST00000355072 ARHGAP11BQ3KRB8 267 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 THEM4Q5T1C6 240 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 TRAT1Q6PIZ9 186 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 LHFPL2Q6ZUX7 228 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 OR4N4Q8N0Y3 316 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 SLC38A9Q8NBW4 561 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 TMEM104Q8NE00 496 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 A8MV72 311 aaPredicted RBP7.42□□□□□ -1.22
HTT-201ENST00000355072 MPPED1O15442 326 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 ISL1P61371 349 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 SIX1Q15475 284 aaPredicted RBP7.42□□□□□ -1.22
HTT-201ENST00000355072 CDC20BQ86Y33 519 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 WDR20Q8TBZ3 569 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 IQCF5A8MTL0 148 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 ZNF28P17035 718 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 SSTR2P30874 369 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 AMTP48728 403 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 UBE2NP61088 152 aaKnown RBP7.42□□□□□ -1.22
HTT-201ENST00000355072 FA2HQ7L5A8 372 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 LKAAEAR1Q8TD35 194 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 TAAR9Q96RI9 348 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 BANF2Q9H503 90 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 UCK1Q9HA47 277 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 RFPL4AA6NLU0 287 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 RFPL4AL1F8VTS6 287 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 GALR3O60755 368 aaPredicted RBP7.42□□□□□ -1.22
HTT-201ENST00000355072 CTSAP10619 480 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 CEBPBP17676 345 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 OR2B8PP59922 312 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 GPR18Q14330 331 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 BTNL3Q6UXE8 466 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 KLHDC8AQ8IYD2 350 aa7.42□□□□□ -1.22
HTT-201ENST00000355072 OR6K2Q8NGY2 324 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms