RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MAPK3P27361 379 aaPredicted RBP16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 FOXL2P58012 376 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 EEF1A1P5Q5VTE0 462 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 EID2Q8N6I1 236 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 STK35Q8TDR2 534 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 TSEN15Q8WW01 171 aaKnown RBP16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 SOHLH2Q9NX45 425 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 PCNX3Q9H6A9 2034 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 CHURC1-FNTBB4DL54 471 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 SRPX2O60687 465 aaPredicted RBP16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 ZNF254O75437 659 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 NUDT14O95848 222 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 HIST1H2ABP04908 130 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 ZNF35P13682 527 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 GTF2F2P13984 249 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 FNTBP49356 437 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 EFNA3P52797 238 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 ZNF117Q03924 483 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 SQSTM1Q13501 440 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 Q6ZS52 159 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 HIST3H2AQ7L7L0 130 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 KDM8Q8N371 416 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 LIPHQ8WWY8 451 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 RBPMSQ93062 196 aaKnown RBP16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 HIST1H2ACQ93077 130 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 MCHR2Q969V1 340 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 C4orf45Q96LM5 186 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 COMMD4Q9H0A8 199 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 CD207Q9UJ71 328 aa16.35■□□□□ 0.21
PTP4A3-202ENST00000349124 WDR87Q6ZQQ6 2873 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 FXYD6-FXYD2A0A087WZ82 144 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 MPZL1O95297 269 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 TXNDC12O95881 172 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 M6PRP20645 277 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 HLXQ14774 488 aaPredicted RBP16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 TMEM184AQ6ZMB5 413 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 DNM1P46Q6ZS02 220 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 ZNF227Q86WZ6 799 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 LINC00052Q96N35 136 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 DCBLD2Q96PD2 775 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 FXYD6Q9H0Q3 95 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 GPN1Q9HCN4 374 aaPredicted RBP16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 ETV7Q9Y603 341 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 PCDH15Q96QU1 1955 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 LGALS8O00214 317 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 GOSR2O14653 212 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 APEHP13798 732 aaKnown RBP16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 MAP2K6P52564 334 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 RAP2BP61225 183 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 ANKRD16Q6P6B7 361 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 GALNT11Q8NCW6 608 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 PRODH2Q9UF12 536 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 ASXL3Q9C0F0 2248 aa16.34■□□□□ 0.21
PTP4A3-202ENST00000349124 IL33O95760 270 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 RENP00797 406 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 IL5P05113 134 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 HSD17B7P56937 341 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 MRPS10P82664 201 aaKnown RBP16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 ZNF440Q8IYI8 595 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 ZNF417Q8TAU3 575 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 REG4Q9BYZ8 158 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 OPN4Q9UHM6 478 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 NUP50Q9UKX7 468 aa16.33■□□□□ 0.21
PTP4A3-202ENST00000349124 TMEM272A0A1B0GTI8 110 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 TMEM212A6NML5 194 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 SLC16A7O60669 478 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 MFGE8Q08431 387 aaPredicted RBP16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 ARHGAP40Q5TG30 622 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 OR10K2Q6IF99 312 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 TTLL10Q6ZVT0 673 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 TMEM151BQ8IW70 566 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 SDR16C5Q8N3Y7 309 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 OTOSQ8NHW6 89 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 FAM3DQ96BQ1 224 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 CDCA3Q99618 268 aaPredicted RBP16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 UTP23Q9BRU9 249 aaKnown RBP16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 TMEM138Q9NPI0 162 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 DHCR7Q9UBM7 475 aaKnown RBP16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 KCNMB2Q9Y691 235 aa16.33■□□□□ 0.2
PTP4A3-202ENST00000349124 TEX51A0A1B0GUA7 166 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 SPARCP09486 303 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 GABRA4P48169 554 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 SEC61A1P61619 476 aaKnown RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 MRPS21P82921 87 aaKnown RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 ZP2Q05996 745 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 ADAM19Q9H013 955 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 ARL6Q9H0F7 186 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 ATG5Q9H1Y0 275 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 MRPL22Q9NWU5 206 aaKnown RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 RABL2AQ9UBK7 228 aaPredicted RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 CGGBP1Q9UFW8 167 aaPredicted RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 RABL2BQ9UNT1 228 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 B9D1Q9UPM9 204 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 A0A1B0GTQ1 180 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 SNRPGP15A8MWD9 76 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 DRD1P21728 446 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 EPHA4P54764 986 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 DHODHQ02127 395 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 RBMS2Q15434 407 aaKnown RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 ACKR1Q16570 336 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms