RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PIEZO1Q92508 2521 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 KLF4O43474 513 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 CLPSP04118 112 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ZP3P21754 424 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 DRD5P21918 477 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 INSM1Q01101 510 aaPredicted RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 RAET1LQ5VY80 246 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 OR52N1Q8NH53 320 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ZC3HAV1LQ96H79 300 aaKnown RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 EMC6Q9BV81 110 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ALKBH4Q9NXW9 302 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 PLA2G3Q9NZ20 509 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 MYOTQ9UBF9 498 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 EXTL2Q9UBQ6 330 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF223Q9UK11 482 aaPredicted RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 RAD1O60671 282 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 HIST1H1CP16403 213 aaKnown RBP11.81□□□□□ -0.52
COL18A1-201ENST00000342220 CLDN20P56880 219 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 FOXK2Q01167 660 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 IL11RAQ14626 422 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 HSD17B12Q53GQ0 312 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 LEG1Q6P5S2 330 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 METAP1DQ6UB28 335 aaPredicted RBP11.81□□□□□ -0.52
COL18A1-201ENST00000342220 C6orf15Q6UXA7 325 aaPredicted RBP11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF511Q8NB15 262 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 OR5L2Q8NGL0 311 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 IL17BQ9UHF5 180 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 SESN1Q9Y6P5 492 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 PCNX1Q96RV3 2341 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 HRGP04196 525 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ACVR1BP36896 505 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 AGFG1P52594 562 aaKnown RBP11.81□□□□□ -0.52
COL18A1-201ENST00000342220 IGLV3-21P80748 117 aaPredicted RBP11.81□□□□□ -0.52
COL18A1-201ENST00000342220 SLC3A1Q07837 685 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 PUDPQ08623 228 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 FAM27D1Q5T7N8 215 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 WBP2NLQ6ICG8 309 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 TMEM99Q8N816 258 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 CT55Q8WUE5 264 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 YIPF5Q969M3 257 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 KCNJ15Q99712 375 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 SHARPINQ9H0F6 387 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 HDHD2Q9H0R4 259 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ANKRD19PQ9H560 264 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 C14orf105Q9NVL8 296 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 CLEC4AQ9UMR7 237 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 HS3ST3B1Q9Y662 390 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 A0A1W2PPL8 197 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 LANCL1O43813 399 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 SUSD5O60279 629 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ARSBP15848 533 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 PNLIPP16233 465 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 PGCP20142 388 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 TBXA2RP21731 343 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 DNASE1L1P49184 302 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 MEOX2P50222 304 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ACSM1Q08AH1 577 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ARL9Q6T311 187 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ASB18Q6ZVZ8 466 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 MDGA2Q7Z553 956 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 NR4A3Q92570 626 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ARL5BQ96KC2 179 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 PARD6AQ9NPB6 346 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 ASB6Q9NWX5 421 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 SDHAF2Q9NX18 166 aa11.81□□□□□ -0.52
COL18A1-201ENST00000342220 A0A0A6YYJ9 748 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 TOX3O15405 576 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-201ENST00000342220 TPOP07202 933 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 IL11P20809 199 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 SHC1P29353 583 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF41P51814 821 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-201ENST00000342220 KLHL26Q53HC5 615 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ALG10Q5BKT4 473 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 RPTNQ6XPR3 784 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 RPS19BP1Q86WX3 136 aaKnown RBP11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ZPLD1Q8TCW7 415 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 OR5B2Q96R09 309 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ALG8Q9BVK2 526 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 MED17Q9NVC6 651 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 IKZF2Q9UKS7 526 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 hCG_1807616A0A1W2PRN6 198 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 BLACEA4D250 179 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 CFDP00746 253 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF3P17036 446 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 TMEM44Q2T9K0 475 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF613Q6PF04 617 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 TFAP2EQ6VUC0 442 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 OR11G2Q8NGC1 345 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 NANPQ8TBE9 248 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 RASL10BQ96S79 203 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 MARVELD1Q9BSK0 173 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 MLXQ9UH92 298 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 TINAGQ9UJW2 476 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 FBXL2Q9UKC9 423 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms